| Id Trinity | TRINITY_DN51802_c0_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_448258 |
| Sequence | TATCCATCTTCCCTTATTATTCTGTCTTTGATTTCTCAATCACCCAGAAAGTAACAGTGATGCTCACTTACCCCTAGACCTCGAAATTTCAATCTATTCT CGATTCTCCCAAATATATATCACACAAAAAATAAAGACTAAAACACAAAAATATTGAAATTTTCTGTTTACCAGAGCAAAGTTGAGAACATACTTTGTGA TGGCCGAGAACAAAGAAACCACCATGAGCCACCTGCCGGAGGAGATCCTGACCATTGTTTTCGCCGCCGTGTCTGACACCCGGACGCGGAACTCTATCTC CCTGGTGTGTCAGAACTTCCTTCGGATTGAGCGTAAGACGCGCGTCTCAATCACGCTCAGAGGTAACGCGCGTGACATGCACCTCCTCCCAACCTCCTTT CGCCACGTCACTGACCTAGACATCTCCAACCTCTCTCCGTGGGGCCACGCGCTCTTCTCCTCATCCGTCAACCCTCACCTAACGGCACTCCGCCTCCGCG ATGCATTTCCGCGCGTGACCTCACTCGCGCTCTATTCTCGATCTCCCATAACCCTCCACCTCCTCCTCCTCACCCCATGGCCTCACCTCCTCCGTGTCAA GCTCGTACGGTGGCATCAGCGACCGCCGGAGTCACCGCAAGGGTCCGACTTCGCCGCCCTGTTTGAGCATTGCCGATCACTCAGCTCCCTCGACCTCTCC AGCTTCTACCACTGGCCCGAAGACCTTCCTCCAGTAATCAAAGCAAATCCGGTAACCGCCGCTTCGCTACGACAACTCAACCTCTTAACGACGTCGTTCA CTGAGGGTTTCAAATCTCACGAAATCACGCAAATCACCGAATCATGCCCTAACCTACAGCACCTTCTTCTTGCTTGCAGCTTCGATCCAAGGTACCTTGG GCACATTGGCGATGAAACCCTGTTATCTATCGCTTCCAATTGCCCGAACCTATCGGTTCTCCACCTCGCTCATACGACGTCGTTTTCGAACCAAAGAGGC GATCCGAATGATGAAGGGTTTACTCATGAGGACGCTAGTGTTAGTACTGCAACGCTGGTTGAGGTTTTCTCAGGGTTACCGTTGTTGGAGGAGTTGGTTC TAGATGTTTGTAAAAATGTCAGAGAGAGTAGTTTAGCTTTGGAAGTGCTGAATTCGAAGTGCCCGAAACTGAAGGCTCTGAAGTTGCGCCATTTTCATGG GATTTGTTTGGCAATTGGGTCACAGCTTGATGGGGTTGCACTTTGTCAAGGGCTGCAATCACTTTCTATTAGTAACTGTGCTGACTTGAATGACATGGGT TTGATTGAGATTGCTAGAGGTTGTTCCAGGTTGAGAAAGTTTCATGTTCAGGGTTGTAAGCACATAACCGAGCAAGGGTTGAGGACCTTGACTTGTTTAC TAAGAAGGACTTTGATTGATGTTAAGATTTCTTGCTGTTTGAATCTTGATGCTGCGGCGTCTCTCAGAGCTTTGGGTCCAATAATGGACCTAATTGAGAG GCTTCATGTGGATTGTGTGTGGAATGGATTGAGAGAAAGTGATAGCGTGGGACAGAGTTTTGTCAATTTTGTTGAGCTCAATGGGTTGGATGAACTCTGT TCTGGTGACCTGAATGAAGATAAATTTGTGGGTGATTTTGGGAATGAGAAATGGGAGGGTAGTAGCCAAAAGAAAAGGCAGAGATATAGTTATTCTTCAT CATCAGAGGCTGATCATTCGTTGTTGCAACACGACGGGAATGGTTACTTGTGCAGCAGCTGGGAAAGGCTGCAATATCTTTCTCTTTGGATAGGGGTTGA CGATCAGTTAACTCCGTTGCCAATGGCAGGGTTGGAGGATTGCCCAAATTTGGAAGAGATTAGCATAAGGGTGGAAGGAGATTGCAGGGGAAAGCCGAAA CCAACAGAGAGTGAATTTGGTTTGAGCATTCTGGCTTGCTATCCTAATCTTACTAAAATGCATTTAGATTTTGGTGATACAAGAGGTTATGCACTGACCG CACCGTCGGGGCAAATAGATTTGAGTCTCTGGGAGAGGTTCTTCCTGAATGGAATTGGCACACTAAGTCTTGAACAACTTGATTATTGGCCACCACAAGA TGAAGATGTGAACCACAGAAGTCTCTCACTACCAGCTGCTGGCTTGCTACAAGAATGTTATACTTTGAGGAAGCTTTTTATCCATGGTAGAGCTCATGAA CATTTCATGAATTTTTTCCTCAAGATACCAAATCTAAGAGATGTGCAGTTGAGGGAGGATTATTATCCAGCACCTGATAGTGACATGAGTACAGAGATAA GAGTATGCAGCCGTTTTGAAGATGCACTAAATAGGCGTCCAATCAGTGACTGAACTGTGATACATGGATACTAACATCATGTCATGTCTTTAGCTTTTTT CCTTATAACCTGTAACATATGCAACTGTCCAAATCTCGAGTGAAGAATAAATAGTACTATACTCAGATTTGAAATAGATTTGATCTTTTTATTGCACATA AAATATTGAAGAGAGATGGATAAAATTCATCTTGTATCTCATTGCCCCAAAAAAGAGACTAGTAGCACAGATACTAGACAAGAGTTGGGCCGTGAAAAAA CAAAATTCACAACTTCAGCCGATAACACAATGTAATAACTCTACCCAAAGTTTTCTATTTACAAAAGACATAATTGTATCAGCACAATGAGTACTCAATG TCTACCAAGCGAGAAAGAATCTCCTCACATCTTGGCCGCTCTTGTGGTTCTGCCCAACATTCTGCACACAACAAATGGAAGTAATTAAGTTACAAAACGG ATCAGTGTTAGTTTAACATGAACATGTTATAAAATGAAAGTTGAAGGAACCTGAAATCAGCCTGCCTAGCGGGCCTTCCGGAATCTCCAATCGGGAACCC TCATTAGCGACGGAATAAACTACCTGATCACCAGAGAAAAAGTGATCGTCTGGTATAAATACTTGAAACTTTTGGACTAAAGAAAATGCGGTAAAAATCT AAACAATCATATCTTGAACGTACCCTCTCAGGTGGAACACCTTCCCATGGTCTGCTCAAGGTGCAGAACTCCCACATTATCACCCCTAAGCTAAAGATAT CACATTTTTCAGTGTAAGGTTCATTTCGGATAAGCTCAGGAGCCATCCATTCTGGAGTTCCAGCCGACGAAGAATCTCTCATTGGAGAATCTGTCATTAT TCTTGAAAGGCCAAAATCACAAATTTTCACAGCCCAGTGCTTATTCACTAGACAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187711; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448258
| Blastp | F-box/LRR-repeat MAX2 homolog A from Petunia with 61.59% of identity |
|---|---|
| Blastx | F-box/LRR-repeat MAX2 homolog A from Petunia with 60.78% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423492.1) |
| Pfam | - |
| Rfam | - |
| GO | - |