Id Trinity | TRINITY_DN51806_c2_g1_i19 |
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Name Transcript | Ll_transcript_447617 |
Sequence | GTGAAAGGGTACTTTTTGGTGGAAAAAAACCTTGAGGGCATATAACCGGCTAAGATTTTTGAGAACTTTGATGATATTTATTGGCTACTTATTTCCCGAA CAGGGCAAAGTACGATAAAATACGAGTTGGTGTATTACTTTTGTGACTCCCTTCTCAAACAAAAGCCTCCAATCTCACTCTTCTTATTCCTAATCGCATA GATTTTCTTTTGTTTCCTTTTCCCCCTCTTTCTCTATTATCAATTTTCGATCTTCATTCCCGGTAAGCCAATTCAATTTTATTATCATCAATTTCTAGGG TTTCGTTTATAATCCCCTATTCACCCCGAATTCTTTCTTCATAGCTAGGAATTCTGTTTGATTTTGAATTGTCTACAAATCCCTAATTCGGCGTGTTTAG GGTTAATTGTGAAATATACGTTTGTTAGGGACTAGTGTTTTCTGTTTGTGTCGAGTATATTGTTATAGGTAGATAGTGATTATATGGCAGCTGGGAGACA TGGCGGTTACCGTGACAATGAGTTCAGGGACCGCGAGTCCAGCGTGCGGGGTTTTTCGAGTTCGAAAGATGAGTTTGATCGTGTTAGGAATGGTGGCCGT GAAGTTGTGAGAGGTGGGAGCAGGGATTCAAGGGATGGGATTAGGGTCAGGCAGAGGGGTGTTAGGGAGAAGGAAGGTTCTGTGAATGGTAGTTATCGGT CCTCGTCGAGTAGGAGTGATTCTGGTAGCAGTGGTGGTGGTGGGAGTGGTGGACCTGGTCCCCGGCGATGTGATTTTTCTGTGAAGCCAATGGATAGGGA GCCTGGTGAGCTTTCGAGTGAGAGTGGGTCTGATGATGGGATTCAGTTGGAATCTAGGGTGGTGAAAGAGACTGAGGTTGTTGCGATGGTTGAAGAAAGC AGGAAGAGGAAGTTTTCGCCGATAGTGTGGGATCGGGATGACAAGGATGTGAATGAGTCATTCAAATCCAAAGTTAGGGTTTCCATGACATCGGTGACTG CACTTCCACCTCCGTCTCTGCTGCCAAAAACGTTTGTTAAGTCACCTAATGTTCCGTCTGGTGCAGTTGACGTATGTCCTGTTGAAACAAGGGAAACTGA GGATCGTGAATTTCCTGTAGAAACTGAGGAACTTGAGTTTCCTGTAGAAGCTGTGGATCGTGAGTTCCCTGTAGAAACTGAGGTTAATGATCAGGAACAG ACTTGGGGTCATGTTCAGGAAGCTGAGCCTGAGCTTCCAGAAGGTGAAGATTATGTTTCAGCTCGGAATATATCATCTTCAAGATGGGCGGCTAGAGATA ATTCTCCTGCCGACGAGGGTGAAATAGTTGAAGATGAGGAAATGCCTAGAAAGAGGAGGATGATGACTCTTGAGGAGTTGGGTACAAGAGTAAGGAGCAA GCTATTGAGTCCGGAGGAATCTATAAGAGAAGGTGGAGCTAAATCAACCGATTCTGAAGGAAGAGGCAGCCACAGGAGGTCTTCCAGTGAGGATGATCAT GCTGGTAGTGCATCTGAAATGGATGAGTACATGGAGATTGATGCTCAAGGTGGAAAAGTTGAAACTAGTGTTAGTCACTCAGATACAGAATCTGAAGATG AGGATCATGGCCGGGAGACAGCAGAACCTCCTTCTCCACCGCAAAGATCAGTTAACATGCTTCAGTGCTGTAGAAGCGTTGATGAGTTTGAGAGACTGAA CAAGATAGATGAAGGAACTTACGGTGTTGTATATAGGGCCAGAGATAAGAAGAGTGGGGAAATTGTAGCCTTGAAGAAGGTCAAGATGGAGAAGGAAAGA GAAGGTTTTCCCCTTACATCGCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCGATCCATAGTTGACGTTAAGGAAGTAGTGGTAGGCAGTAGCC TTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGTCAATCAAGCAACCATTTAGCCAGAGTGAAGTGAAGTGCTT AATGATTCAGCTTTTAGAAGGTGTGAAGTATCTTCATGAGAATTGGGTGCTTCACAGGGATTTGAAGACTTCGAACCTTCTCCTGAATAATAGGGGCGAG CTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAACCGTATACACAGTTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTC TTCTGGGGGAAAAACAGTATTCGACAGCCATTGACATGTGGTCTCTAGGTTGTATAATGGCTGAGCTATTATCTAAGGAACCAATATTTAATGGGAGAAC AGAATTTGATCAACTCGACAAGATTTTCAGGATTCTTGGCACACCAAACGAATCAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTT GTCAAGCACCAGTATAACCTACTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGC TTCTTACTTATGACCCTGAAAAGCGGATAACAGCTGAAGCCGCCCTCAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTCATGCC TACATTTCCTGCTCAACATGCTCAGGACAGGCGGGCACGAAGGGTGTTGAAGAGTCCAGATCCCTTAGAAGAGCAGCGCCGAAAGGAGTTGCGGGGTGAA ACAGGGACCGGGGGGATTTTTGGCTAAAAACGGTGCATCAAAACCTATATCTCAATGTTCATTCTAACACCACTGAATATTTGCATGTATGAGGTGAGAG TATGCGCCTATGCGGTGAATGGAAGTTGCGAGCTTTGTCTGTTAGATCATTCGTACTTTTTATAGCAGGAACTTGTTGGTTTTAGCAGAGATGTATTCTT TTACCTCCTTGGAACCAGATTTATTTCAGGTTAACCTTCTTTATGCTCGGCCATTATATAGAAATGCATCTGGGTTAATGCTTGCAGCTCAAGGTGTTGC ATTAAGTGCCTTCTGAAAATAGGAATAGTCAGTGTCTGCTGAAACTTGTGTATGTAATATATTTTCATTGGTATATCTAGACAAATTTTATCTGGTTGAG TTTTAAAGCAGTATGAATTTTCTAGCAGCTATCAGTTCTTTCTTTTTTTAATATTCACATTGTGTTTGCAAGAGACTGTTGATGTGAAGTGGAAGATGAC CTTCCGTGCATTTCATTGAAGAAATTGACAGTGATTTTATGCATTAAAAGTATCAAAGCAAGCAGGTTGAGGAGGTTACCAGTATACTCTAAAGTATAGA ACTTCAATTAGTTGTTCCTTCAGGCTCTCTAGAGGTACACAGTGCAAACCTTGGTTTGTTATGATGTGTTTCTAAAGTTCATGCTATAATAATTCCTTAT TTTTTAAGTCACTTCCTAGACAGTGTGATATGTGATTGATTATGAAATCATAGTATTGTGCCTTTCTTGGATGTTTCATTTAATTTTCATGGTCAAGTAT ATGATTGAATAAGAGAAGTAGAGAACTAACTCCTGGAGAAAGCATTTATCAAGTTGTGCCCTGTGGTTTGTTGAGAAACTTATCTCATTTCCCAAGGGTG GTTATGGAACCTTGCATGAGCTTGTTTGAAAATATCAACATGGGTCTGAAATAATGTAAATATATAATTCCTTTTGGCTCTAACTGTATTCAGGCTATTA CATAATGTCCAGTAAATGTAGTTTTCCTCTGCTAATTCCTTTTGAATCTACCATTTTCATCAAGTTCCAAATGATAGATTAAGTTTTCTGGTTCATATAC TGGATGGATACTTTGTAAGGGTTTGAAATAAGAAGTTCCATGATCCTAATAATTCCATCTTTTATGTATGTTCTATGTTGATAATTACCCCAGGAGTTAT TTGTTCAATTGTCTAATATTGTTTCTTTTATTTCCTTGCTGTTGTTAACATATATCAATTAGACATTTTCCTGTTACATCAGATATCAGATACCAGATCT TGTGTTCAAATGCTGAAATTTAATGGTGATCAAATTGTGAGGTTATTTGTTATGAAACTATCATTTACTAATGAAATGGCTTGTATCTTGTGGCTATCTG TGACTTCTTTCTTTAGGATTTTCGAGTTGATTTTTAGAGGGAAAAGGAAGGCTTGAGAGTTATCTCACATATGTATTTCATGACTTTAAAGTCTTTCCCT CCTGTCCATCACCCTCCGATATCCAACTCGCAAATGCACCCTCAAGGTCCCATTATCTTTTACCCATTAAAGGAATTAACATCTGCAGCTTTCCTATACC TATAGGCTTTGGAATTGTAACCTCTTAATAAAACATTTATATGTTTTGCCAACAATTGATTAATTTCTATAATGCTCCATGTAGTACAATATATTAATTG GCAGCTAGGAGAAGGGGTTGCTTGAAAATGCAAAGCCTCCACTCCCCATTTACACCATATACTTGCAATTAGTTTTTAACTTTTTAGGTTGTAGGAATGT GATGACATCGAAGGTAGATGAGGGCTAGGTAAAAGTATGTTGGGGTTAGATAATTAATATGAACTAATTAACATTCAAGGAATTGGGATATCAAATTTGA AGTTGTGATGAAGTGGTAAAATATACCATCAACATGCTTGCCTGGTAGAGCTTCTGAGGACCTGATTTAAAGAGTTGGAATTATCTTACGTGCAGCATGG TGTGCTTCTTGGCCTGAGTGGGCTTCATTTAGACAGTGCCTAAGTGCTATCGGTGGTGGTGCTTAGACCGTGACAATGATTTAATTCAATATGGAGACTT TGATTACATGAGAGCCATTTTGCCTGAGAAATATAGAAGGTAATGCAGTTTGCCAATTAAGTATTTTAGACTGAAGGTGCCAGAAGAGTTTTCAGGAAAT ATACTTAAATGGCACGCCAATGGGGGTTGTTGATGTGCTTTTTAAGGCAAAGCTATGCGTGATTCAAACTAAATGATAGCTGAACCTATCTAGTTGGATT TAGGTTAAGCATGTGTTTGGTATAAATTGTGTTTCTACATAATGATTATAAATTGAGATCATAAATTTTAAAATAAAATAAAATATTCCTTCA BLAST |
Tissue | pods |
Gene name | LI_gene_187737; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447617
Blastp | Cyclin-dependent kinase G-2 from Oryza sativa with 54.71% of identity |
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Blastx | Cyclin-dependent kinase G-2 from Oryza sativa with 59.9% of identity |
Eggnog | Cyclin-dependent kinase(ENOG410XQ50) |
Kegg | Link to kegg annotations (4336224) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460153.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |