Ll_transcript_446168

• Id Trinity: TRINITY_DN51812_c1_g1_i12
• Name Transcript: Ll_transcript_446168
• Sequence: ATTCTCTGTTAACTGATATGACCAACCAAAATTGCATGAACTGAACATAACCACCCACAGTTTTTTTATATTTGTAACTGTACAACCTTTGTATTCTGCT AAGTACAACTTGAATCTTGTACTATGTTATGTCCTATTATTTCCTTATCTTACTTTTTAGGCTCTAAAATCTATGTGGAAAACTGATTTTATGTATGAAG TGTGCATCATCATTATGTTAACTCTCCCTATACACTCTTTATTTCTCTCTCCTTAAAAGGTGCACAAATTTTCCCTTTAATTGACTACCCCATTTCTCAC CAAAAAAATTTCAAAAACCAAATCTTTTTTTTTCTGTTGTTCTTTATATATACCATACATAACACTATACCATATGGCAAAAGAACAGCAAAAACAGGAC ACTGCAATCACAACCAAGTTTCTTCACCATCAAACCCAGGGGAAAGTCCCAGAGAAAGAAAAGGAATTGGGACTCAAAATTGAAGAGGCTGATTCTGAGA TTCAGGTTCCTTTGCCTCTAACAGTTACTTCCAGGGCTTTGTATATGTTGGAAGATTTCACTGCAGGGCCTGCGTTTCGGTTCACGCAATGGCTCCAACT TGTTCGTAAACGCACCGCTAAGTATCGTTCCCCTGGCTTCCCTCACCGCACTTCCTCTGCAATTGCCACTGCCGCCCTCATGTCTTCTAGTTCTAGCGCT GGAGAGTCGATCGAGGATGCAAAATGGAATGTGCATCCTGATCAAACAGAAATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGCAACATTGGATATTGAAT CAAGTTCCTTTTCTTGGGACACACTCACTTCACTGCACCACTCTGAACATACCAGCAGCAATGAACTTTCCGAGGATGAAATGAACAAAGCTCTTGAGGT AACTGTAAATTCTGGAGGGGTTGTTTTCTTTGCCTTTTTCAATCACGATGACACGTTTCCGAAAGAAGCAGCAGCTGTTATAAAGATCTCATCATCAAGA ATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCGAAATGGCTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTCAGAGTGGC ATCAAATAAAGGAAGCAACAGAAAAAGCTAGAGAGATAGCATGTTCTGAGGGTGATGAAGTTAGTGAAATGACATGTTTTGAACTTTTGGAAGCACTTGA TCTTAGCCGGTGTCTCTTCTTTATGAATTATGTACATGGTTCGCCTTTGCTGGAAAGCTCTAGTGCATTTGAGTCACGGGAATCTGCAGAAAGAACATCA GCAGCTCTTGGCAGGGTACTAATGTTGGACCTTGTCATCAGGAATGAAGATAGGCTCCCGTGCCGTGAGCTTAGGTGGCGTGGGAATTCTGCAAATTTGT TGTTGGCTGAAAAGATGACATCTGAAAATACAGATACACTACAAGCAGTTATTGATTCTGCAATTAATCGGTATAGACCTAAGGTGATTAAAGCACTTCA GAAAGAAAGAAGGTCAACTTCTGCAGATAGCAGATTTGATTCTCATAAAGGACCTCTCTTGATATCGCAAACCTCTGATCTTACAGAGATCACAGAATCA CCAGGATCCACTGATACGATGAGCCTTAAAAGTCAAACATCGGGAGAATCATTGTCTCCTGACTTCAATATTGTAGCCATTGATTCTGGTGTTCCTCGCC GACCTCCTGCTGGGAAGCGTACAAATGATCAGGTTAATTATCCTAAATTGGTTGAGCTGCTTCTCAATAGTTCTGAGTTTGGCTCGAACGTGTTATATGA TATCACTGGAGGGAAATTAGGATTTCCATCACCAGAAGACATAAATACAACGTATATACATGCTAGTGACATGACACCAGTTATTCAAGCATTCCGAACT GGTTTCCGTGGTGCTCTTAGGGATCTGCAGGGATTTCAAATATTCCTTCTCACACTTCACCAAAGACTTGATACCTTGTTCCGATCATTTATGAACATCA TAAGCAAAATATCGTCAGGGGAATCTGACAAAGATGATCCAATGGTTCCTGACTCACCTTCACTGGCTGCTAGTGTTAGCTGTTCCTCTACACCAAGTAA GGAGAGGTTTGCTAATGAAAACCATCAAGATTTTACTGATTCGGAGTCACAAAAGTCTGCTTCAAGGTCATCATCTTCAGGCAATAGAGATTGCTGTGAC TCTGCTTCAAATGTGTCAAGGGAAAGTTGGCATGGGAAGTTCAATAAAGGAAGTGGCGGGGAGCAACTTCGTAGTCTCCGCTTGACAGCTAGGCTCCGTG ACTTCAATAAATTTTTTAAGGTTGATGCTGAATCTAATAAGGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCCATCAAGCTATGTCAGGAGAA CAATTTCAATCCAGGATTTTTTGAGGGTAGTGATAATAACAGTGTTGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATCCTTGAGAGAATTGCA TTGATATCTGAGGCTGCAAGTACAGAGAGACCATCTGCTGTTACAAGTAGTTTGTTCATTGGTGGAGCACTAGCTGCAAGATCTGTATACACGCTGCAAT ACTTTGGAATCACACATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGATTCACAGTTTCCTGATATATTTGAGTACAAAAATTTCTCTGTAAG TCATATTTTTTATTCTCTTGTCTATTTTTATCCTCAATTATATATTGGAAGGGAAGAGATTTAGTTTCTTTGAGAATCAATTGACCAGATTGACTACTTT TCTCATTTATTCTAAAATTCCCATGCAGGACTGATCAAAGTTAATAATTTCATTTGAGCTTTAGGATTTTGTTCATTTCCCAATAATAACTTCTTGGTTT TCCTATGACTATTGTCAACTGCAAATCATCCTAAAATTTTGTGTTTTTGGTGCATGCTTAGTTAATGCTGGACAACAAGGGTATCATAGAAATCCCCTTA ATGATGTGATTTGCTACCCAATATGATATGTTTCTTGTTCTTATGTGTTTTGATAATGCTATTTTCTGTGGTAAATTTTCTATTAGTATTAGGCTCCTTT CAGGAAAGTTTCTTCACATTGTTTCCTTTCACTCTCCCATTTCAGCAGGTGTGTGACAATGAAGATTTTAACATCAGTAGCATATTTGAAGAAGCTTGTG ATTTTATAGATTATGTTGAACAAACTGGTCAGAAGGTCTTAGTTCACTGCTTTGAGGGGAGAAGCAGAAGTGCTACCTTGGTCCTTGCTTACTTGATGCT CAGGAAGAAGTTCACACTATTGGAAGCATGGAATGCTCTGAAACGAGTTCACCGTCGTGCACAGCCCAACGATGGTTTTGCAAAGATCTTACAGGAACTG GATCAGAAACTGCATGGGAAGATTTCAATGGAGTGGCAACAGCGAAAACCGACAATGAAAGTTTGCCCTATCTGTGGGCAGAATGCTGGACTAAGCAGCA GCTCACTTAAGCTACATTTGCAGAAATCACATAGAAAACTATCATCTGGGAGTGTAGATAGTGCTATGACAATGGAGATACAAAAGGCATTGACAGCTTT GAAGATTAGCCGTGGCGGGAGTGTCAGCCCCACGCAAAGGTCGTCTCATTCAATAATAGATGAATAGATACTGCAAAATGTGATTTCTATACAAAATATC AGCAGGCTAGGAAATTGAGTAGGGTAACACCCGAAGTCTATTATTGGATGATGTGAAAAAAAATCACTCATCCCATTGGGGGAATGCATAAATTTCAATC AAAAACCTGAATTTGTGAAGTGAGTTAGTCACCCAAAGCAGAGGTATTTTACCTCACGTGTAAATTTCATTGGCATACAATTATTTGCAGTTAATGTATT ATGAATTTGTGATCTCAAGTACAAATTAAACCTTAACAATAATTTAAAGAATGTACTGAACTTCAAAACAAC
• Tissue: pods
• Gene name: LI_gene_187793;
• Additional information: details;

Expression of Ll_transcript_446168

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.3
• PS3: 0.4
• PW1: 0.2
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446168

• Blastp: Dual specificity protein phosphatase PHS1 from Arabidopsis with 58.85% of identity
• Blastx: Dual specificity protein phosphatase PHS1 from Arabidopsis with 60.22% of identity
• Eggnog: dual specificity phosphatase(COG2453)
• Kegg: Link to kegg annotations (AT5G23720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457919.1)
• Pfam: Actin-fragmin kinase, catalytic (PF09192.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;