Ll_transcript_446180

• Id Trinity: TRINITY_DN51812_c1_g1_i24
• Name Transcript: Ll_transcript_446180
• Sequence: CCAACAGTGGGTGAACAAGTATGACAGGTTGATGCCAACCCCTAATATCATCCATCCACCTTACTTAAAAACTATTAAAGTAGTTTTAGTGGGAAGGAGT AGTAGTGGGCCTATCTTTTTCCCTTCCATCCTGGAAAAAAGCAAAGTGACTGCAATTTAGTGCACATCTTTTAAACCCTCCTTACTTACAATATCCCAAA TGAGCAAGAAAAGCATAAAAAGCCAGACTTTCCTCAAAACCAGGTTCACAGAGTGGGGCTTCATTGGCTCTCACAGTTACTTATCAGGTATTGTATATGT TGGGAGACATAACAACAGGACCTGACTATTGTTTCACGCATTGGCTCCAATTTGTTTGTAAACGCACTTCTTCTATGTATCATCGATTTTCCATGCCTTC TAGCCCGACAAAATCTGTTGAGGATGGAAGGAGTGATCAACTATCTGAACAAACAGAAATTAGTTTATGGGAGAGGCTTGGCAGAGCAGAAATGTTAGAC GTCGAATCGAGCTCATTTTCTTGGGACCGGCTATCTTCACTATACCATACTGAACACAGTAGCAGCAATGACCATTCCGAGGATGAAATGAACAGAGCTC TTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCCTTTTTCAATGGCCTGGGGTATGATGATGGTTTTCCAAAAGAAGCAGCAGCTGTTATAAA GATATCATCGTCAAGAATGGCAACACAGTCTGAACGCCTTGGGTATGAATTTGCCAAGTGGTTAGGAGTCCCAACTCCACAGGCTAGAGTCATTCACAAC ACCACTTTGGAATGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCAAGAGATGCAGCAAGTTCTAAGGGTGATGACATTGGTGAAATGACATGCTTTGAAC TTTTGGAAGCACTTGAGCTTAGCCGATGTCTCCTTTTTATGAGTTATGTACATGGTTCGCCTTTGCTTGAAAGCTCTTGTGCATTTGATTCACGGGAGTC GGCAGAAAGAACATCAGCAGCCCTTGGCAGGGTAATGATGTTGGACCTTGTTATCAGAAATGAAGATAGACTTCCTTGTCGTCAACTAAGATGGCGTGGG AATTCTGCAAATTTGTTGCTGGCTGAAAATATGATCTCTGCAAATACAGACACACTAGGAGAGGCTTTTGATTCTGCAATGAACCAATACAAGCCGAGGG TGACTAGGGCACTTCAAAATCAAAGGTCAACTTCTGATAGCAGATTGAGTTCTCATAATCCTGTGTTGGCATCAGCAGGCTCTGATCTTTCAGATATCAA AGAATCACCAATATCTGCTGACATGAGCTTTAAAGGCCAAACATCAAGAGAATCATTGCGTACTGACTTTAACATTGTGGCTATTGATTCTGGTGTTCCT CGCCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTTAACTATCCCAAGTTGGTTGAGTTGCTACTCAATAGTTCTGAGTTTTCCTCTAACCTGTTAC ATGATATAACTGGAGGAAGATTAGGATTTCCTCCGCCAGAAGACATAAATACAACAACTGATATACATGTAAGTCATGTAACATCAGTAGTTCATGAGTT CTGTGGTGGTTTTCGTGCTGCTCTTAGGGACCTGCAGGGATTCCATATATTCCTTCTCACACTTCATCAAAAACTCGATAACTTGTTAAGGTTATTTATG AAAATTATAAGCAAAATATCGTTGGGGGAATCTGAAAAGGAGGATTCAGTGGTTCCTGACTCACCCTCTCTGGCTGCTATTTTCAGTTGTCCCCCTCCAA TAAGTAAGGAGAGGTTTTCTAATTATAACCATCAAGATTTTAGTGATTCAGAATCACAGAGAAGCGCTCCAAGGGAATCATCATCTTCTGGCAATAGAGA TTGTTGTGACTCTGCTTCTTCTATGTCAAGAGAAAGTTGGCATGGAAAATCACTTCGTAGTCTCTGCTTGACAACTAAACTTCGCGACTTTCATAAATTT GCCAAGGTTGATGCAGAATCTAATAAAGAATTGGAACAATGGAATGAAATGCTTAAAAATGATGCCATCAAGTTATGCCTGGAGAACAATTTCAACTCCG GATTTTTTGAGGGTAGTGATAACAACAGTGTTATTGATGCATATGAACTGAAGGTTAGACTTGAACATATCCTTGAAAGGATTGCATTTATATCTGAAGC TGCAAGTACAGAGAGACCATCTATTGTTACAAATACTCTGCTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAACACTTAGGGATCACA CATATATTGTGTTTGTGTACTAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTCTACGTAAGTCATTCTCGTATCT AATTTTTATCCCCG
• Tissue: pods
• Gene name: LI_gene_187793;
• Additional information: details;

Expression of Ll_transcript_446180

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 1.7
• PS2: 2.5
• PS3: 1.3
• PW1: 0.6
• PW2: 0.7
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446180

• Blastp: Dual specificity protein phosphatase PHS1 from Arabidopsis with 59.83% of identity
• Blastx: Dual specificity protein phosphatase PHS1 from Arabidopsis with 59.89% of identity
• Eggnog: dual specificity phosphatase(COG2453)
• Kegg: Link to kegg annotations (AT5G23720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437201.1)
• Pfam: Actin-fragmin kinase, catalytic (PF09192.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;