| Id Trinity | TRINITY_DN51812_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_446160 |
| Sequence | CATAACATGAAAATGTAGATCAGAATTGGATCATCATTTTACAATAATTTACGTGAAGGTGGATACATTGCAGAACAAAGTCCCAGAGAAAGACAAGGAA TTGGAACTCCAAATTGACGACACTGATTCTGAGATTGAGCTTCAATTTCCTCTCACAGTTACTTCCCGGGATTTTTATATGTTGGAAGAATTCACTGCAG GGCCTGCGTTTAGCTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACCACCAAGTACCGCTCCTCTGGCTTCCCTCACCGCACTTCCACCACCACCAC CACCGCTGCCCCCGCCACCATTGCAGCCATGTCTTCTAGTTCTAGCACCGGAGAATCAATTGAGGATGCAAAGCAGGATCAAGAAATTAGTTTGTGGGAG AGGCTTGGGAAAGCTGAAATGTTGGACATTGAATCAAGCTCCTTTTCTTGGGACAGCCTCACTTCGTTGCACCACACTGAACACACCAGTAGCAATGAAC TATCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTTTTCTTTGCCTTTTTCAATCGCAATGATATTTTTCCAAAAGA AGCAGCAGCTGTTATAAAGATCTCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTTCCAAGTGTTTGGGAGTCCAAACTCCAGAG GCTAGAGTCATTCACAATACCAGTTCAGAGTGGCACCAAATAAAGGAAGCTACAGAGAAAGCTAGAGAGGTAGCATGTTCTGAGGGAGATGAAGTAGGTG AAATGACATGTTTTGAACTTTTGGAAGCGCTTGAACTTAGCCGATGTCTCTTTTTTATGAGTTATGTGCACGGTTCACCTTTGCTTGAAAGCTCTAGAGC ATTTGAGTCACGGGAATCTGCAGAACGAATATCAGCAGCTCTTGGCAGGGTACTAATGTTAGATCTTGTCATCAGGAATGAAGATAGGCTCCCCTGCCAT GAACTTAGATGGCGTGGGAACTCTGCAAATTTGTTGTTGGCCGAAAAGATGATATCTGCACATACAGATACACTAAAAACAGTTGTTGATTCTGCAATTA ACCGATATAGACCAAAGGTGATTAGGGCACTTCAGAAAGAAAGAAGGCCAACTTCTGCAGATAGCAGATTGGATTCTCATAAAGGACCTGTCTTGATATC ACAAACCTCTGAACTATCAGAGTTCACAGAATCACCATCCACTTACATGATGAGCCTTAAAGATCAATCATCAAGTGAACCACTGTCTCCTGACTTCAGC ATTGTAGCCATTGATTCTTGTGTTCCTCGCCGGCCTCCTGTTGGAAAACGTGCAAATGATCAGATTAATTATCCTAAATTGGTTGAGTTGCTTGTCAATA GTTATGAGTTTGGCTCAAACGTGTTATATGATATAACTGGAGGGAAATTAGGATGTCCTCAACCAGAAGACATGAATGCAACTGATATACATGCTAGTGA CATGACATCAGTTGTTCATGCACTCCGCACTGGTTTTCGTGGTGCTCTTAGGGATCTGCAGGGATTTCAAATATTCCTTCTCACACTTCACCAAAGACTT GATACCTTGCTCCGATTGTTTATGAACATTGTAAGCAAAATATCTTCAGGGGAATCTGACAAAGAGGATCCATTGGTTCCTGACTCACCTTCACTGGCTG CTAATGGTAGTTTTTCCTCTACGCCAAGTAAGGAAAGGTTTTCTAATGAAAACCATCAAGATTTTACTGATTCAGAATCACAAAAGTCTACTTCAAGGCG GTCATCTTCAAGCAATAGAGATTGTTTTGACTCTGCTTCAACTGTGTCAAAGGAAAGTTGGCATGGGAAGTTCAATAAAGGAAGTGTGGGGGAGCAACTT CGTAGTCTCCGCTTGACAGCTAAGCTCCGTGACTTCAATAAGTTTTCCAAGATTGATGCTGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTA AAAGTGATGCCATCAAGCTATGTCAGGAGAACAATTTCAATCCAGGATTCTTCGAGGGTAGTGACAATAACAGTTTTGTTGATGCCTATGAACTTAAGGT GGTTATAATTAGTTCTTATAGTATGGAGGACTGAATATTAGATTCCTTTCATTTATGATGGATTTCTAATTTTCTATTTACGTGTGCTTTAACCCTTTTA ACTTTCAGGTCAGACTTGAGCATATCCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187793; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446160
| Blastp | Dual specificity protein phosphatase PHS1 from Arabidopsis with 57.4% of identity |
|---|---|
| Blastx | Dual specificity protein phosphatase PHS1 from Arabidopsis with 56.85% of identity |
| Eggnog | dual specificity phosphatase(COG2453) |
| Kegg | Link to kegg annotations (AT5G23720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457919.1) |
| Pfam | Actin-fragmin kinase, catalytic (PF09192.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |