| Id Trinity | TRINITY_DN51813_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_447162 |
| Sequence | AATTGTTTTACGATAATAATATATGAAAATATAGAAAATATGTTATTTTTCTTTTTCTAAAAAAGATATTGGATATGACAGTAATTAGTTTTGTTTGAGT ATATATTTCAGGTCATTTTCTGCTAACAAAGTTATTACTGGAGAGGATGGTTGAAACGGCAAAGAAGACAGGGATACAAGGCAGGATCGTGAACGTGACA TCTGGAATACACGGGTGGTATTCAGGGGATATGATATCATATCTAAGTCTTATAAGCTGCAATAAAAGCGATTATGATGCCACACGTGCTTATGCTCTTT CCAAGCTTGCCAACCTTTATCACACCACCGAGCTTGCGCGCAGACTACAGCAAATGGAGGCCAATGTGACAGTGAATTGCGTTCATCCAGGGGTAGTGAG AACCAGACTCACTAGAGAGCGTGAAGGCTTACTTACAGATTTAGTATTCTTTTTGGGTTCCAAGCTCTTAAAGACAATTCCCCAGGTAAAATACAAAATA GGATTATGTATTTTGTATCATCTAAATTTATCATATTTGTCCTCTCTGATCAGGACTTAGTTTTTTTTTTGCAATTTCTTTCGTTAGTTTTGCAGTTTCT AAAACTGCTTTTTTATATTATATTGTGTTATATAGCAATCTTACAATTTTTAATTTTTTGATTTATTTATTAATTTCCATAAGAAAAATAGAGATTATCG GGATGTTAATTTAGTGATGGGTATTGGCATAGAGATTGACACACATCCCGAAAGTAGCCGAAAGTAATTAATTTCTTATCTGTAGGAACGAAATATAACT TAGTTATTATAGCTATACCAATGGGGAAGGAAATTTACTCCAAAAGTAAGTTTAAAAAACTTACTTCTCATCTTAGTTATCAATTCTAGAGAATTTCAAT GGTTTTAATTACTAATAAATTCAAACTAGTGGATTTCAAATGAGTTGATTGTTAAGATGATGAGTAAGTCTAAGAGTAAATTGATCTTCATCCTATAACA ATAATTGAAATAGAAGACCCAAAAGAGATTAATTCATTAGTAAGGGTAAGGAGATATCTTTGGTAGTAGAAAGAAGAAAGAGGATCCAACCCCTTAGAGC ATTCACAATAGTAATGAAAAATCATTCTAGGAGAAATAAGCATGTTTTTTTGATCAAGTTCATTAGTGGAGAAGATTCATTATTCTTCTTATTTCGCAAG AGTAAACTAAATAAGCACAATTCTTAAATTGGTGAATCAATATTAAAAAATGAAAAAAAATGTTATAAGAGAGAATAAAACAATAATAAACAAAATAAAA TAAAAGAGAAGAACAAAAATAGAGTTATACCATTGGAGTTGATTTTGACTTGAATTTATTAAGTTGTTGGAAAGTGTAAACAAATATAAAATAATCAATG AAACTCATTTAAAAACAAAAAAGGTGTTGCACCATTGTGAATACTCTTATAGTTTTAAAAATTCTTAAAAATGTAAAAAATTGATTTAATTGGTCTATAA TAACTATTTAAGTCTTATTGGAAACTACATTAAAGATAAATGGAGAAATAAGGCATGAAAAAGAAGAGTAGTAAATAAGGTTATGGTTGGACAATAGAAT ATTTTAGATTTCTAAAACATCATAAGATTTGGAAAATATAAAAACATTAAAACATTAAAAATATGAAATAAAGCAAATAGTAAGTAAATTAAATTCATGA ACCAAGTTTAAAACTTTGACACTTTAAAACTTGATCCTTTTTTGGTGATTCCAATCAAGCTTTATATACTTCTTCAAACTTTGACAATTTTGATCCACAA TAAAGGTGGATGGATAGAGAATTTCAAATTTTGATTTGGAGCACTTCAACTTTGCATATTAGTTTTGACCAATACGAAGATTAGAAACATTAGACAAATG AGATATTACCACAGGTTGAACAAAATCGTTAAGACAATGGTTTTATGGATCTTTTCCATTTATAAACTATCTCACTCGTTTTCATGAGGTGTTGGTGTAG TGGTGTAAGACCCTACTAGATCTCTAGGACAACCAATATGTCAAATGTTCGATTCCTGAGAGTGACGCTTGTTGGGAGGGACCCCGAAAGAGATTAGTTC CTTACCCAAAAGGGTGAAATGATATCCTTTATAGTACCAGAAAAATGTAGGACTTTATAATTAAATATACTCAACAATATCTACTAAAGTGTGGACACCA CACACTTAGTGACTCACTCCTCCTTAAGTCCACCATGTCACAGCTGAATCATCGACTTTGATATCACTTGTTGGACTTGTCCGCAATCATATAGTGTCCA ACGACCGAGGAGTCCCATCGTTACCGTGCATGGGAAGAGAGAACAACTACAAATGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_187797; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447162
| Blastp | - |
|---|---|
| Blastx | Short-chain dehydrogenase TIC 32, chloroplastic from Arabidopsis with 38.4% of identity |
| Eggnog | Dehydrogenase reductase(COG1028) |
| Kegg | Link to kegg annotations (AT4G23430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420506.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |