| Id Trinity | TRINITY_DN51815_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_446973 |
| Sequence | ACTCTTCTTATATAATAATATATAATATACGAGAGATAGAGCAACAAAATATAGTACTGTAGCGATTGCGACTAAATAAAAATGGCGTCGTTATGGCGCG TCGCAACCAAGTTCTCTCTTCTCACCGCCGCCGTGGGCGGTGGCACAACTGCCGCGCTTATTGCTTCCTCCGACGATCCCAAGACAGCTCTGAAACTTGC CACAACCGTCCCCCGCCGTCTATTCCGCGACGCCGTCACTGCCGCTAACATTGCTTTCGATTATGAATATTCACTATGGGGAGTGCCGGAAGGGAGCACC GAGTGGGAGAAAATCAAGCATGAAGTTCACCTCCGGTCGGCGCAAAAACTTCAAGAGCTGTGTTTTAAGAATGGAGGAATTTATATAAAGCTTGGACAGC ATCTTGGGCAGTTGGAATACTTAGTTCCTGAAGAATATGTTACAACAATGAGGAACTCTATGCTAAATAGATGTCCAGTTTCTTCATATGAGCAAATATG TGAGGTGTTCGAGAAAGAGTTTGGAGAAACACCAGATAAAGTATTTGCTGAGTTTGATCCAGTTCCAATTGCAAGTGCTTCTCTAGCACAAGTTCATGTT GCCCACACGCATGATGGCAAGAAAGTTGCTGTGAAGGTTCAGCATACTCACTTGACCGATACTGCGGCTGCAGATAATGCCATTGTGGAATTTATTGTGA ACACTCTGCATAGGTTTTTCCCCAACTTTGATTACAGGTGGTTGATTGACGAGATTAATGACAGTTTACCCAAGGAATTGGATTTTCTGATGGAGGCAAA GAACAGTGAGAAGTGTTTGGAAAACTTCCGGAAGTTGTCTCCTCATATTGCAAATTATGTATATGCACCTAAAGTATATTGGAATTTGAGTACCTCAAAG CTGCTAACAATGGAGTTCATGGATGGTGTTCATGTAAATGATGTAAAAACCATTCAAAAACTAGGGATCAATCCACATGAACTTTCAATATTGGTCAGTC AAACATTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCGCATGCTGCTAACTTATTGGTTCGGCCATTGCCTTCTGAAAAAAGTAGCAT TCTGGGCAGGAGAAAACCACAGTTGATTCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCGACACAAGAACTAATTATGCAGGACTGTGGAAGGCA TTAGTATTTTCTGATGCTAATTCAATTAAGGAATACAGTTTAAAATTGGGTGCTGGAGAGGATTTATATGCCCTTTTTGCTGGAATTCTAACCATGAGAC CATGGGACAGAGTTGTGGACCCATCCATGGATCATTTAGTAATACACGGAGATGAGAGTGAACGATTAGAGCTGCAGATGTATGCCTCTGAATATGTCCA TGAAATCTCGGATCTTCTACGGAGACTACCGCGTGTGATTCTTCTAATGCTGAAGACAAATGACTGTTTACGTGCTGTTAACAATGCTCTGTTTCAGGGA TCTTCTCTAGAGACATTTCTTATCATCGGAAAGGTTTCTTCCCAAGCTATCATTGATGCAAAGATGTCGCAAAGCAAGTCCCTTTTAACATGGCTGAATG TTGAATTCGATAAATTTTGGCTCGAACTACGATTTTGGGGAATGCATTTAGCCTTGTGGCTTTTACAACTAAGAAAATCATTGTCTTATTAAGGATTATA AAAGAAGACCAACTCAGCCTAATTTATTTTCTGCTACATTTTCTTTAAAAAAACACAGAAAAATAAGTTGTTATATTCTTTGTCTCCGTGGTCATAAACT CCTTCCCAATTTGAAGATTCTTTTTGCCCACGGTTTGGTTAATTAATGTTATAGGTTATAAGAGAAGGGAAAGGAGAAAGTCATTCATTTTTTGTTAACC TTGTATGCCATACAAGGTATTCATGTATTAGGTTATGTAGCATGATGTAAATCCCCATTGATAGGGGAAAGGTTGAGTGAGAAATATTGAATACTTTTTA CATTAATTTCAATGGTAAAGTAATGGACCTATACAATAAGTGTTTGGCATTCAATCTATGGAACTTTGTTGTGCAAGAATGCAGTGAGAAAGTTTTTATA TGTGAATTATATACAATGCATGGTGCTGATTTTACAAGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187816; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446973
| Blastp | Putative ABC1 protein At2g40090 from Arabidopsis with 75.61% of identity |
|---|---|
| Blastx | Putative ABC1 protein At2g40090 from Arabidopsis with 75.61% of identity |
| Eggnog | Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661) |
| Kegg | Link to kegg annotations (AT2G40090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417870.1) |
| Pfam | ABC1 family (PF03109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |