Ll_transcript_446974

• Id Trinity: TRINITY_DN51815_c1_g1_i5
• Name Transcript: Ll_transcript_446974
• Sequence: ACTCTTCTTATATAATAATATATAATATACGAGAGATAGAGCAACAAAATATAGTACTGTAGCGATTGCGACTAAATAAAAATGGCGTCGTTATGGCGCG TCGCAACCAAGTTCTCTCTTCTCACCGCCGCCGTGGGCGGTGGCACAACTGCCGCGCTTATTGCTTCCTCCGACGATCCCAAGACAGCTCTGAAACTTGC CACAACCGTCCCCCGCCGTCTATTCCGCGACGCCGTCACTGCCGCTAACATTGCTTTCGATTATGAATATTCACTATGGGGAGTGCCGGAAGGGAGCACC GAGTGGGAGAAAATCAAGCATGAAGTTCACCTCCGGTCGGCGCAAAAACTTCAAGAGCTGTGTTTTAAGAATGGAGGAATTTATATAAAGCTTGGACAGC ATCTTGGGCAGTTGGAATACTTAGTTCCTGAAGAATATGTTACAACAATGAGGAACTCTATGCTAAATAGATGTCCAGTTTCTTCATATGAGCAAATATG TGAGGTGTTCGAGAAAGAGTTTGGAGAAACACCAGATAAAGTATTTGCTGAGTTTGATCCAGTTCCAATTGCAAGTGCTTCTCTAGCACAAGTTCATGTT GCCCACACGCATGATGGCAAGAAAGTTGCTGTGAAGGTTCAGCATACTCACTTGACCGATACTGCGGCTGCAGATAATGCCATTGTGGAATTTATTGTGA ACACTCTGCATAGGTTTTTCCCCAACTTTGATTACAGGTGGTTGATTGACGAGATTAATGACAGTTTACCCAAGGAATTGGATTTTCTGATGGAGGCAAA GAACAGTGAGAAGTGTTTGGAAAACTTCCGGAAGTTGTCTCCTCATATTGCAAATTATGTATATGCACCTAAAGTATATTGGAATTTGAGTACCTCAAAG CTGCTAACAATGGAGTTCATGGATGGTGTTCATGTAAATGATGTAAAAACCATTCAAAAACTAGGGATCAATCCACATGAACTTTCAATATTGGTCAGTC AAACATTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCGCATGCTGCTAACTTATTGGTTCGGCCATTGCCTTCTGAAAAAAGTAGCAT TCTGGGCAGGAGAAAACCACAGTTGATTCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCGACACAAGAACTAATTATGCAGGACTGTGGAAGGCA TTAGTATTTTCTGATGCTAATTCAATTAAGGAATACAGTTTAAAATTGGGTGCTGGAGAGGATTTATATGCCCTTTTTGCTGGAATTCTAACCATGAGAC CATGGGACAGAGTTGTGGACCCATCCATGGATCATTTAGTAATACACGGAGATGAGAGTGAACGATTAGAGCTGCAGATGTATGCCTCTGAATATGTCCA TGAAATCTCGGATCTTCTACGGAGACTACCGCGTGTGATTCTTCTAATGCTGAAGACAAATGACTGTTTACGTGCTGTTAACAATGCTCTGTTTCAGGGA TCTTCTCTAGAGACATTTCTTATCATCGGAAAGGTTTCTTCCCAAGCTATCATTGATGCAAAGATGTCGCAAAGCAAGTCCCTTTTAACATGGCTGAATG TTGAATTCGATAAATTTTGGCTCGAACTACGATTTTGGGGAATGCATTTAGCCTTGTGGCTTTTACAACTAAGAAAATCATTGTCTTATTAAGGATTATA AAAGAAGACCAACTCAGCCTAATTTATTTTCTGCTACATTTTCTTTAAAAAAACACAGAAAAATAAGTTGTTATATTCTTTGTCTCCGTGGTCATAAACT CCTTCCCAATTTGAAGATTCTTTTTGCCCACGGTTTGGTTAATTAATGTTATAGGTTATAAGAGAAGGGAAAGGAGAAAGTCATTCATTTTTTGTTAACC TTGTATGCCATACAAGGTATTCATGTATTAGGTTATGTAGCATGATGTAAATCCCCATTGATAGGGGAAAGGTTGAGTGAGAAATATTGAATACTTTTTA CATTAATTTCAATGGTAAAGTAATGGACCTATACAATAAGTGTTTGGCATTCAATCTAAAAAAATAGAGAATGGAAAGGGAAGAAGAAGAAGAAGAAAGA AGAGAAGCAGCGATTGCATCAACACGATGCCTTCAACCTAATTTCAACCCCAAAGGATCACTCACCAAAGATCACCTCGCAAAGTTTCGTGAACTACACA ACAAGCGCTTACAGCTTAAATCAAAATCAAAATCAAAGTTTAAGACAAAATCTAAAGGTGGTGCCACTGCGAAGAAATCACATTGCAATGATCTATCAAG CCAAAGCAATCGATCGGAAGCTTTAAGAGTTGATAACGAAGAACCAATCCTCCGGGTTTGTGAAGGTTCTGATAGCATTAATGAAGATTCAAAGGATAAT GTATCTGTGTTTTATGCACCAAAGAAGCAAAAATTGCATTGGGGGCTTGACACCAAGGAGAGGTGGGAGAGGAAATCCAACATGTAGAATTATAGATACC ACCATGGAAATCCAGTGCAGTGAGCAATGCTTGAAATTTCATCAAAATGTCTAAAAATAGCTGTTGTGTTTTTGGGATAACCCTAGAAGTGCTCAAGTAA TGGTGCATTTGTGGTTTTAAATGATGGTTTTGGAAACATCGAAACCTTGACTTTTCGGACATTTGCAGGCATTTGTGGTTGATGCGGCCACAATTGTAGT AATGATACGATTTCGTCGACTCAAAACCTTGACATATCAATGTCTGTAACTGTTGCTCCTAAATTTAAAACCTTGATTGATGTTGAGATTACATCATATA TAGTTAACAGTGTTATAATTCAA
• Tissue: pods
• Gene name: LI_gene_187816;
• Additional information: details;

Expression of Ll_transcript_446974

FPKM

• PAB: 3.6
• PNAB: 3.4
• PS1: 4.9
• PS2: 2.5
• PS3: 3.4
• PW1: 4.4
• PW2: 3.7
• PW3: 5.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446974

• Blastp: Putative ABC1 protein At2g40090 from Arabidopsis with 75.61% of identity
• Blastx: Putative ABC1 protein At2g40090 from Arabidopsis with 75.61% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT2G40090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417870.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;