Ll_transcript_445813

• Id Trinity: TRINITY_DN51821_c0_g1_i1
• Name Transcript: Ll_transcript_445813
• Sequence: TGATTTTCATACAGTATTGATTATGTTAACTTGTAGAGAAATGAAACCACAAAGAACACCATTATTACCAAATCTCAAACTTTCTATTTCTATTCATATT TCTCAAATTTCCCTTTAATTCATTACTTTTAATCGATTTTGGTTTATCCCAATCGTAAGATCCCATACATCGCAGTGTGATGAATGATTTGAATTGATCA ATTCGAAGAAATAGCATGGCGAATCAGGTTACTGTGAGAGACCTTGTTGAAGAAGCCAAGAAACGCATTATCATTCTCATCGTATGTGTTGTTGGTCTCT CATATCTCATGTCTTTGACAAGCTCATCGGTTTGGGTCAACTTGCCAGCTGCAGCTTCCTTAATTATCACTCTCCGCTATGTATCACTAGATTTTAAAAT GAAGAGAAAAGCAGCTACATATAACAATAAGGCAAGCTCCACCAATGTTCAGTCTTCGAAGAAGCTTCCTGAAATCCCTAAAGTTGTTGCAAAGTTTGAA TGGAGAGAAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGACCACTTCACCAGACATCTAGTTTCTGAGTGGGTGACAGACCTGTGGTACTCTCGCT TAACTCCTGACAAAGAGGGCCCTGAAGAGTTGGTTCAACTAATAAATGGTGTTATTGGCGAAATTTCAGGACGCATGAGAAATATAAATTTGATTGATTT TTTGATAAGGGATCTTATTAATCTCATCTGCACACATTTGGAGCTTTTTCGCGCTGCTCACTCAAAGATTGAAAAACAACATAAAGGTTCATTAACAATT GAATGCCGAGATACAGAACTAAAACTTGTCTTGGCTGCTGAAAACAAATTGCATCCCGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGCAGCATC TGGTGAGTGGTCTTATGTCTGTCACTTTCAAATCTGAGGATTTGCAGTGTTCTTTCTTTCGAAATACTGCCAGGGAGCTTCTTGCATGTACTGTAATAAG ACCTGTCCTAAACCTAGCCAATCCAAGATTTATCAATGAAAGAATTGAATCTGTAGTAGTTAATAAGATCAAGGTTAATAAGGGGGCTGCTGCAGCTCCA GAGGCATCCAACACTAAAGTAGATGAATTGCAGATTCCGCCTGACCATTTTTCCGAGTGTTTAGATCCTGCTACTGGTGTTGAACTTGTGCAGCTAAGAA ATGGCCAATCAAAAAATGCAAAAAAGTCATCTGCAGGAAATAAAGCCAATGACAATTTTACTAAAGATCCATTACTTGCAATTGATGCCCGATCTTCCCG TTCATGGACATCATTGCCTGCAAACTCCCATGCTAATGATGATCAAGGCATTCAACGGCATCACTCAGGAGGAGAATGGGGAGATATCTTAGATGTCATT TCTCGCAGAAAGACCCAAGCCCTTGCTCCAGAACATTTTGAGAACATGTGGACAAAGGGAAAAAATTACAAGACAAAGGATGGTGGCAAACACTCAAATG AGCAAGTCCCACCACATCCTGTCATAGGAAAATCACTAATGGTAGATCATATGAAGGCTACTGGGTCCAAGGAAAAAGATAGAACTTCCAAGCTTAATCC CTCTATGGGAAGCCTCATCAATTCTGGACCCAGCAGTCGGTTTACCGTTAAAAATGCAGCCTTCCGTGTGGACAAGGATGTATCAAGTTCTCCAGTTACA TTATATAAAGATGATGAGCACAATGACATGCATACACAGATGGGTGAATCAGAGAACAGTACTTCTTGTACTTCTGAAGATGATGAAGCTAATACTGTGA CTGGTCTTGATTCCCCGGTAACCAAGGTTTGGGATGGAAGAGCTAATAGAAAACAGTCTGTTACTTATGTTCACCACCCACTTGAAATTTTTGACAATCA TGGTACAAAAAAGAGGAATAAGGGCCACTCTCGCTATCCAAGACTACCCAGAACTCAATCTGGCAGTAGAAGGTCTAGGCCAAGTGGTCATGACATACAG ACATGGCAGGAAGTTGAGAGAACAAGGTTTTTATCTGGAGATGGTCAAGACATACTTAGTTCTTCAAGATCACATGTAAATTCTGAGGACTCTAGTGATG GTGATGATGATACTGAAAGTTCCGGTAGAATTTATAGTGGAGCAACAGCCTCTTCTTCCGCATCCTCTATTTCTAAATCAGAATCTCATAGTTTGGCTGT TTATCCCCTGAAAAGTTCTCCAGTATCAGATTCTTTTTTCAGGTTGAAATGTGAGGTCTTAGGTTCAAGTATTGTGAAGAGTGGTTCAAAAACATTTGCT GTTTACTCCATATCTGTAACAGATGTAAACAATAACACCTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAACTACATCGACGCCTGAAAGAGTTCC CTGAGTATAATCTTCATTTGCCTCCAAAGTATTTTCTGTCAACAGGTTTAGATATAGCAGTCATTCAAGAGCGGTGTGGATTGCTGGATAGATATTTGAA GCAACTTATGCAGATGCCAGCAGTTTCAGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCCCAGACATACATATTCTCGAATTCATTTTCTATC ATGGAAACTTTATCAGTTGGCCTGGATGCTAAGCCATCTGAGAAGACTAAAATCAGTTCCAAATTTTCTGCACCTGCAACCGACAGTTTTGCCTCTCAAA GAGATAACTATAGCTCTGAAAGTAAAGAAGCTGTTCTGCGAACGAGAAATAATGTTGTGGCTGATGGATTTAGGTCTAAAGTAAATGATAAAACATGGAA GAGTGGACCTGCTCCCAGTAACTTGGAGAAGACAGTTAAAGGAAGGGATAGTTTAGACGGGGTGTCTGGTTTGTACCATGATACTTCTGATACTTTTCCA ACAGAGTGGGTGCCACCAAATTTGAGTATACCAATACTGGATCTGGTTGATGTTATCCTCAATCTTCAAGATGGTGGATGGATTAGGCGGCAGGCTTTTT GGGTTGCTAAACAAGTCTTACAATTAGGAATGGGCGATGCCTTTGATGATTGGTTAATAGAGAAAATCCAGCTTCTCCGTAAGGGGTCAGCGGTTGCTTC AGGAGTCGAGCGAGTTGAGCAAATACTATGGCCTGATGGAATATTTCTAACCAAGCATCCAAATCGACAACCACCACCACCTTCTAGTCCATCTCAGAGC TCACCTCAAAGCCATCAATCTACAGTATCTTCCCCAAGGGTAGATGATGTACAGCAGCGGGAGGCAGATCGGCGTGCCAAGTTTGTCTATGAGCTAATGA TTGATCAAGCACCACCAGCAATTGTAGGTCTTGTTGGTAGGAAGGAGTATGAGCAGTGTGCTAGGGATCTATATTTTTTTCTTCAGTCATCTCTGTGCTT GAAGCAGCTAGCTTTTGACCTCCTTGAGTTGCTGCTGTTGTCAGCATTTCCAGAACTAGATGATGTATTCAAACAAGTGCATGAAGAAAAGCACAAATTT GGTGAGTTTAGAACAAATTGAATATTATAAATTTTTATCTGAGACAAGGAGATTCAAATGGGTGGTGTTATGTCTTCTAAATTTACATCTTTAGTGATTA AATTTTGCATCTTGATGGAGCCATTTGTAAATTGAGATTAATGCAATTACCTGAATATTTTTTGATTAAAACTTTGCCTAGTGGTCCATTGATGGTTAGA TAGTGAGG
• Tissue: pods
• Gene name: LI_gene_187869;
• Additional information: details;

Expression of Ll_transcript_445813

FPKM

• PAB: 2.8
• PNAB: 6
• PS1: 7
• PS2: 4.3
• PS3: 5.9
• PW1: 4.4
• PW2: 4.9
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445813

• Blastp: Sorting nexin-12 from Schizosaccharomyces with 38.3% of identity
• Blastx: -
• Eggnog: -
• Kegg: Link to kegg annotations (SPCC16A11.04)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443442.1)
• Pfam: PXA domain (PF02194.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;