| Id Trinity | TRINITY_DN51821_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_445828 |
| Sequence | TTTCTCTTTTTTTCGAAAAATATATATAAGATTTGGTTTTTCACATTTGATGATGGTGTAGACTTGAAAGAGGAGACCATAGCAACACAGCAATATATCA TATCATATATTGAAATGTGAAATTTTGTGAATGAAAGATTCTGCAATCAAAATTATTCATTCAATTTCTCTCTTTCAAATTTCACCATTCAATTCTTTCA CTTTCATTCCAAATTTCGTTCATCTCAATTTCACAATCCCTTAATCTCAATAGTGCTCTGAATTGAGTGAGTTAGGTTTAGTTATTTTCTCAATTGAAGA AAAAAAAGCATGTCGAATCAGGTTTCAGTGAAAGACCTTGTTGAAGAAGCCAAGAAACGTGTTGTAATTCTTCTTGTTTGCGTTGTTGGTCTCTCATATC TCATGTCACTGACAAGCTCGTCAGTTTGGGTCAACTTGCCTGCTGCAGTTTCCTTAATCATCATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAG AAAAGCTGCTGCATATAACAATAAAGCAAGCTCCACTAGTGTTCAGTCATCGAAGAAGCCTCCTGAAAACTCTGAAGTCGTTGCTAAGTTTGACTGGAGA GCAAAAGTTAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACTAGACATTTAGTTTCTGAGTGGGTGACAGACCTGTGGTACTCTCGCATAACTC CAGACAAAGAGGGGCCTGAGGAGTTGGTTCAAATAATAAATGGAGTTCTTGGGGAGATTTCAGGACGCATGCGAAATATAAATTTGATTGATTTTTTGAT AAGGGATCTTATTAACCTCATTTGCACACACTTGGAGCTGTTTCGTGCTGCTCACTCAAAGGTTAAAAAACAACATAAAGGTTCACTAACAATTGAATGT CGAGATACAGAACTAAAACTTGTCTTGGCTGCTGAGAACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGAAGCATGTGGTGA ATGGTCTTATGTCTGTCACTTTCAAGTCTGGGGATTTGCAGTGTTCTTTCTTTCGATATACTGGCAGGGAGCTTCTTGCATGTGCTGTAATGAGACCTGT CCTAAACTTAGCCAATCCAAGATTTATTAATGAAAGGATTGAATCTGTAGTAGTTAATAAGACCAAGATTAATAAGGGGGCTTCTGCGTCTCCAAAAGCA TCCGACACTAAAACAGATGAGTCGCAGATTCCATCTGACCAATTTTCCGAGTGTTTAGATCCTTCTGCTAATGGTGTTGAACTTGTGATGCTAAGAAATG ATCAATCAAAAAATGCAAAAAAATCATCTGCACGAAATAATCCCAATCATAATTTTAATAAAGATCCATTACTTGCAATTGATGCTCGTTCTTCTCGTTC ATGGACATCATTGCCTGCAAACTCTCATGCTAATAATGACCAAGGTATTCAACAGCATCACTCAGGAGGAGAGTGGGGAGATATCTTAGATGTCATATCT CGCAGAAAGACCCAAGCCCTTGCTCCAGAGCATTTTGAGAATGTGTGGACGAAGGGTAAAAATTACAAGAAAAAGGATGGTAAGAAACAGTCAAATGAGC AAGTCTCACCACATCCTGTTGTAGGAAAATCGCTGAAGGTAGATCATATGAAGGCTACTGGACCCAAGGAAAAGGACAGAACTCCCAAGCTTAATCCCTC TACGGGAAGCCACATTAATTCTGAAAATGTAGACTTCCATGCAGACAAGAATCGACCAAGTTCTCTAGTTACCTTATATAAAGATGATGAGCACTATGAC ATGCATATGCAGATGGGTGAATCAGAGAGCAGTACTTCTTTTACGTCTGAAGATGATGAAACTACTACTGTCACTGGTCTTGATTCCCCTGTAACTAAGG TTTGGGATGGAAGAAGTAATACAAAACAGGCTGTTACTTACGTTCATCACCCACTTGAAAATTTTGATAATCATGGGAGAAAAAAGAGGAATAAGAACCG CTCTCGCTATCCGACACTATCCGTAACCCAATCGGGGAGTAAAAGGTCTAGACCAAGTGGTCATGACATACATACGTGGCAGGAAGTTGAGAGGACAAGG TTTTTATCAGGAGATGGTCAAGACATACTTAGTTCTTCAAGATCACATGTAAATTCTGAGGACTCTAGTAATGATGATGATTATACTGGAAGTTTGGGTA GAATTTATAGTGGAGCAACAGCCTCTTCTTCCACATCCTCAATTTCTAAATCAGAATCTCATAGTTTGGCTGTTAATCCCCTAAAAAGTTCTTCAGTATT AGATTCTTTTTTCAAGTTGAAATGTGAGGTCTTAGGTGCAAGTATTGTGAAGAGTGGTTCAAAAACATTTGCTGTTTACTCCATATCCGTAACAGATATA AACAATAACACCTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAACTACATCGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCTCCAA AACATTTTCTGTCAACAGGTTTAGATATCACAGTCATTCAAGAGCGGTGTGAATTGCTGGATAAATATTTGAAGCAACTTATGCAGATGCCAATAGTTTC AGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCTCGAATTCATTTTCTATCATGGAGACATTATCAGTTGGCATGGAT GCTAAACCCTCCGAGAAGACTAAAATTGCTTCCAATTTTTCTGGATCTGCAAGTGACACTTCTGCCTCTCGAAGAGAAAACTATAGCTCTGGAAGTAAAG AGGCTGTTTTGCAAACAAGAAATAATGTTGTGGTTGATAGGTTAAGGTCAAAAGTAAATGGCATGTCTCCTTCTCTACCAGTAAAGAATGCACAGGAATC TAGAAAGTCATTGGAGAGTTCTGGTGGTAATACAGATATTAGAGTTTCTCCCAATAACTTGGAGCAGACAGTGAAAGTAAGGGATAGTTTAGACAAGGTG TCTGATTTGCACCATGATACTTCTGATACTCTTCCAGCAGAGTGGGTACCACCAAATTTGAGTGTACCAATACTGGATCTGGTTGATGTTATCCTCAATC TTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAACAAATCTTACAATTAGGAATGGGTGATGCCTTTGATGATTGGTTAATAGATAA AATCCAGCTTCTCCGTAAGGGATCAGTAGTTGCTTCAGGGGTTGAGCGAGTTGAGCGAGTAATCCTCTCAACCATTTATTTTTTAAATTTGTGATGTTCT GGAACTGTCCTCGTCAATATAAGTTTCTTTCTCTTTGATCAAATGATATATTTATATTCCTTATATTATACAACAATGATAATCTCTCTTTGCAATAATA CAGTTCTAATTACTGTGATGGGGCAGAATGCTGTGTACAGTGATTAGATAAGTGTATGATGTACTGATGAGGTATTGTGACTGCAACTTCAATAGATACT CTGGCCTGATGGAATATTCTTAACCAAGCATCCAAAGCGACGACCACCACCGACACATTCTACTTCATCTCAGAGCTCATCTCAAAGCCATCAATCCGCA GAAGTATCTTCCCCAAAGAAGGTTGATGAGCAGCAACGGGAGGCAGATCGGCGTGCGAAGCTTGTCTATGAGCTAATGATTGATCGAGCACCACCAGCAA TTGTAGGCCTCGTTGGTCGAAAGGAGTATGAGCAGTGTGCTAAGGATCTATATTTTTTCCTTCAGTCATCTGTTTGCTTGAAGCAGCTAGCTTTCGACCT CCTTGAGCTGCTGCTGTTGTCCGCATTTCCGGAACTGGAAGATGTATTCAAGCAACTGCATGAAGAAAAACACAAATTTGGTGAGTTCAGAGCAAATTGA ATATTATAATTTTTTAGCTGAGGCAAGGAGAGGTTCAAGGGTGTGGGTAGTTCTGTATTCCAAGTTCACATCTTTTTGAATGCTCTGGTTGCACCATTCG TCTTTTCGCGTCCATCTGTTTCGGCCTGTTGATTAGGTGAAGGCAATTCAACTTTTCCGTTTACAAAGTTTGGTTTTGTAATTAAATTTTGCATCAAGTG CGAGCCTTGTGCACTATATCGCCCTTTTAGGGAGTGTAAATTCTGAGATTAATGCAGTTACTTTAACATTCTTTTTTTTCTAACCATTTTCTTTCTGGAT GCTGGGTTTCTTGGTTCAGGTTTGGAGATTCTTGATAATAGCATGGGTCTCTCTTTCTAAGTTTTTGGTTGAAAGTTAGGGTTTTTATTTTAGTTATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_187869; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445828
| Blastp | Sorting nexin-16 from Homo with 29.81% of identity |
|---|---|
| Blastx | Sorting nexin-13 from Mus with 22.46% of identity |
| Eggnog | sorting nexin 16(ENOG410Z8KU) |
| Kegg | Link to kegg annotations (64089) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431807.1) |
| Pfam | PXA domain (PF02194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |