Ll_transcript_445829

• Id Trinity: TRINITY_DN51821_c0_g1_i17
• Name Transcript: Ll_transcript_445829
• Sequence: TTTCTCTTTTTTTCGAAAAATATATATAAGATTTGGTTTTTCACATTTGATGATGGTGTAGACTTGAAAGAGGAGACCATAGCAACACAGCAATATATCA TATCATATATTGAAATGTGAAATTTTGTGAATGAAAGATTCTGCAATCAAAATTATTCATTCAATTTCTCTCTTTCAAATTTCACCATTCAATTCTTTCA CTTTCATTCCAAATTTCGTTCATCTCAATTTCACAATCCCTTAATCTCAATAGTGCTCTGAATTGAGTGAGTTAGGTTTAGTTATTTTCTCAATTGAAGA AAAAAAAGCATGTCGAATCAGGTTTCAGTGAAAGACCTTGTTGAAGAAGCCAAGAAACGTGTTGTAATTCTTCTTGTTTGCGTTGTTGGTCTCTCATATC TCATGTCACTGACAAGCTCGTCAGTTTGGGTCAACTTGCCTGCTGCAGTTTCCTTAATCATCATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAG AAAAGCTGCTGCATATAACAATAAAGCAAGCTCCACTAGTGTTCAGTCATCGAAGAAGCCTCCTGAAAACTCTGAAGTCGTTGCTAAGTTTGACTGGAGA GCAAAAGTTAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACTAGACATTTAGTTTCTGAGTGGGTGACAGACCTGTGGTACTCTCGCATAACTC CAGACAAAGAGGGGCCTGAGGAGTTGGTTCAAATAATAAATGGAGTTCTTGGGGAGATTTCAGGACGCATGCGAAATATAAATTTGATTGATTTTTTGAT AAGGGATCTTATTAACCTCATTTGCACACACTTGGAGCTGTTTCGTGCTGCTCACTCAAAGGTTAAAAAACAACATAAAGGTTCACTAACAATTGAATGT CGAGATACAGAACTAAAACTTGTCTTGGCTGCTGAGAACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGAAGCATGTGGTGA ATGGTCTTATGTCTGTCACTTTCAAGTCTGGGGATTTGCAGTGTTCTTTCTTTCGATATACTGGCAGGGAGCTTCTTGCATGTGCTGTAATGAGACCTGT CCTAAACTTAGCCAATCCAAGATTTATTAATGAAAGGATTGAATCTGTAGTAGTTAATAAGACCAAGATTAATAAGGGGGCTTCTGCGTCTCCAAAAGCA TCCGACACTAAAACAGATGAGTCGCAGATTCCATCTGACCAATTTTCCGAGTGTTTAGATCCTTCTGCTAATGGTGTTGAACTTGTGATGCTAAGAAATG ATCAATCAAAAAATGCAAAAAAATCATCTGCACGAAATAATCCCAATCATAATTTTAATAAAGATCCATTACTTGCAATTGATGCTCGTTCTTCTCGTTC ATGGACATCATTGCCTGCAAACTCTCATGCTAATAATGACCAAGGTATTCAACAGCATCACTCAGGAGGAGAGTGGGGAGATATCTTAGATGTCATATCT CGCAGAAAGACCCAAGCCCTTGCTCCAGAGCATTTTGAGAATGTGTGGACGAAGGGTAAAAATTACAAGAAAAAGGATGGTAAGAAACAGTCAAATGAGC AAGTCTCACCACATCCTGTTGTAGGAAAATCGCTGAAGGTAGATCATATGAAGGCTACTGGACCCAAGGAAAAGGACAGAACTCCCAAGCTTAATCCCTC TACGGGAAGCCACATTAATTCTGAAAATGTAGACTTCCATGCAGACAAGAATCGACCAAGTTCTCTAGTTACCTTATATAAAGATGATGAGCACTATGAC ATGCATATGCAGATGGGTGAATCAGAGAGCAGTACTTCTTTTACGTCTGAAGATGATGAAACTACTACTGTCACTGGTCTTGATTCCCCTGTAACTAAGG TTTGGGATGGAAGAAGTAATACAAAACAGGCTGTTACTTACGTTCATCACCCACTTGAAAATTTTGATAATCATGGGAGAAAAAAGAGGAATAAGAACCG CTCTCGCTATCCGACACTATCCGTAACCCAATCGGGGAGTAAAAGGTCTAGACCAAGTGGTCATGACATACATACGTGGCAGGAAGTTGAGAGGACAAGG TTTTTATCAGGAGATGGTCAAGACATACTTAGTTCTTCAAGATCACATGTAAATTCTGAGGACTCTAGTAATGATGATGATTATACTGGAAGTTTGGGTA GAATTTATAGTGGAGCAACAGCCTCTTCTTCCACATCCTCAATTTCTAAATCAGAATCTCATAGTTTGGCTGTTAATCCCCTAAAAAGTTCTTCAGTATT AGATTCTTTTTTCAAGTTGAAATGTGAGGTCTTAGGTGCAAGTATTGTGAAGAGTGGTTCAAAAACATTTGCTGTTTACTCCATATCCGTAACAGATATA AACAATAACACCTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAACTACATCGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCTCCAA AACATTTTCTGTCAACAGGTTTAGATATCACAGTCATTCAAGAGCGGTGTGAATTGCTGGATAAATATTTGAAGCAACTTATGCAGATGCCAATAGTTTC AGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCTCGAATTCATTTTCTATCATGGAGACATTATCAGTTGGCATGGAT GCTAAACCCTCCGAGAAGACTAAAATTGCTTCCAATTTTTCTGGATCTGCAAGTGACACTTCTGCCTCTCGAAGAGAAAACTATAGCTCTGGAAGTAAAG AGGCTGTTTTGCAAACAAGAAATAATGTTGTGGTTGATAGGTTAAGGTCAAAAGTAAATGGCATGTCTCCTTCTCTACCAGTAAAGAATGCACAGGAATC TAGAAAGTCATTGGAGAGTTCTGGTGGTAATACAGATATTAGAGTTTCTCCCAATAACTTGGAGCAGACAGTGAAAGTAAGGGATAGTTTAGACAAGGTG TCTGATTTGCACCATGATACTTCTGATACTCTTCCAGCAGAGTGGGTACCACCAAATTTGAGTGTACCAATACTGGATCTGGTTGATGTTATCCTCAATC TTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAACAAATCTTACAATTAGGAATGGGTGATGCCTTTGATGATTGGTTAATAGATAA AATCCAGCTTCTCCGTAAGGGATCAGTAGTTGCTTCAGGGGTTGAGCGAGTTGAGCGAATACTCTGGCCTGATGGAATATTCTTAACCAAGCATCCAAAG CGACGACCACCACCGACACATTCTACTTCATCTCAGAGCTCATCTCAAAGCCATCAATCCGCAGAAGTATCTTCCCCAAAGAAGGTTGATGAGCAGCAAC GGGAGGCAGATCGGCGTGCGAAGCTTGTCTATGAGCTAATGATTGATCGAGCACCACCAGCAATTGTAGGCCTCGTTGGTCGAAAGGAGTATGAGCAGTG TGCTAAGGATCTATATTTTTTCCTTCAGTCATCTGTTTGCTTGAAGCAGCTAGCTTTCGACCTCCTTGAGCTGCTGCTGTTGTCCGCATTTCCGGAACTG GAAGATGTATTCAAGCAACTGCATGAAGAAAAACACAAATTTGGTGAGTTCAGAGCAAATTGAATATTATAATTTTTTAGCTGAGGCAAGGAGAGGTTCA AGGGTGTGGGTAGTTCTGTATTCCAAGTTCACATCTTTTTGAATGCTCTGGTTGCACCATTCGTCTTTTCGCGTCCATCTGTTTCGGCCTGTTGATTAGG TGAAGGCAATTCAACTTTTCCGTTTACAAAGTTTGGTTTTGTAATTAAATTTTGCATCAAGTGCGAGCCTTGTGCACTATATCGCCCTTTTAGGGAGTGT AAATTCTGAGATTAATGCAGTTACTTTAACATTCTTTTTTTTCTAACCATTTTCTTTCTGGATGCTGGGTTTCTTGGTTCAGGTTTGGAGATTCTTGATA ATAGCATGGGTCTCTCTTTCTAAGTTTTTGGTTGAAAGTTAGGGTTTTTATTTTAGTTATGG
• Tissue: pods
• Gene name: LI_gene_187869;
• Additional information: details;

Expression of Ll_transcript_445829

FPKM

• PAB: 0.2
• PNAB: 2.8
• PS1: 3.2
• PS2: 3.1
• PS3: 3.2
• PW1: 3
• PW2: 2.8
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445829

• Blastp: Sorting nexin-16 from Homo with 29.81% of identity
• Blastx: Sorting nexin-13 from Mus with 22.46% of identity
• Eggnog: sorting nexin 16(ENOG410Z8KU)
• Kegg: Link to kegg annotations (64089)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431807.1)
• Pfam: PXA domain (PF02194.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;