| Id Trinity | TRINITY_DN51825_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_446567 |
| Sequence | CTCTTCAATTTGCTTCTATTCAGTTCTATATATGTCTCATTTCTTTGTCCAACAACACAACCTTTTACAGTTTCCAATAATTTCTCCCCCAACTCCTCCA TCACCATAATACATAGAATGTCTTCGCCGGGCTTCACCGCCGGTGCCGCCCCTGACTTTTTCTCCACCATGCCGTCAACAACCATCATCAACAATCCCAC CACCACCACCACCCTCAACAACCACCACCACCTTCTCCCTTCTCACCCGATATACCGAACCCAACAACAACAACAACTACCCTCAATTTTTCTAGATCCT TCTTCTCAGATCCCTCAGCAACGTCAAATCCAAACCCTCATGGGTAAACGCACCCTCGCTGAATTTCAAAACCACCGCAACCACAACCACAACAACCTTA ATCTCAACCATAACAACCTTAACAATGACCAGAACCATGTTTTCTCGAACGTTCTACTCCGCTCTGTGAAACCCAGAACAACGTTTCAACATGGTTCTAC TTCTCCGTTATCTCCTATGGATTTTTCCGTTCCGGAATTACATAACCCTAATTCGGTATATCAATCGCAGCGTTTTGGCATGCCACTTCTTCAGCAGCTT CGCCCTCAACCCATTAACCTTTTCAACACCAACACCAATTCGATCTTCCAGAACCCAAATTTTCCTTACCGGACCTCAAACTTGAGTCAGATTCCGAACC AGGTTCAGTTTCAACTCCAACCCTCTGAACCAGAGAAAAAGATGATGGAAAACCGGCTTCAAGAACTTGAGAAACAGCTTCTCGAAGATAACGATGAAGA AGAAGGAGAAGCTGATACAGCATCAGTGATCACAAACAACGAGTGGTCAGAAACAATTCAGAATCTGATTAGTCCTAACCCAACACAGAAACCGGTTTCT TCATCTCCAACTTCATCGACTACATCATCAACTTCATCTTCTTCCTCTATCGTATCACCTAGTTTTCCAAGACAAGAGCTTTTGGAAGCTGCATCTGCAA TTCATGAAGGGAAGAATGAAACTGCTCTGGAGATTTTAGCCCGGTTGAGGCGGGTCGGGTCAAACCCGAACGAGAATTCAGATCAGCGGTTGAACAATTG CATGGTAATGGCGTTGAAATCGCGTATGAACTCGGTTGAAAACCCTCCTCCGGTGGCTGAACTTTTCAGTAGGGAACACGCTGAGTCGACTCAGTTGATG TTTGAAAACTCGGTTTGTTTTAAAGTTGGGTTCATGGCTGTGAACATAGCAATACTTGAAGCGGCATTTGAAGAAGGAAACGAGAAAGGGTTCTGTGTTG TTGATTTTGATATCGGGCAAGGGAAGCAATATATGAGTCTCTTTCATATAATTTCGGCGCGTAAGTCTCAGTCGCCGATTGCGATGAAGGTGAAGATTTT GGCTGTGGAAGAGAACGGTGGAGAAGAGAGGCTGAGAGCGGTGGGTGAGATGCTGAGTCGACAGGCTGAGAGGTTGAAGATCGAGTTCGAGTTCAAAGTT ATGGCGATGACTCAGAAACTCGATGAGTTGACTCGCGAGTCACTTTGTTTAGACTCGGATGAGACCGTTATTGTGAATTTTGCGTTCAAGTTAAACCGAA TCCCCGACGAGAGCGTTTCCACGGAGAATCCACGCGACGAGCTTCTGAGGCGCGTGAAGGGACTCGCTCCGCGCGTGGTGACGTTGTTTGAGCAGGAGAT GAATAGCAACACGGCGCCGTTTTTGGCGCGTGTGGCGGAGTCGTGCTCGTATTATGGCGCGTTGTTTGACTCAATTGATGCTGTCATGGGGAAAGACAAC TCGGATCGAGTCAGGGTGGAAGAGACACTGAGCCGGAATATGTGTAACTCGGTGGCGTGTGAGGGAAGGGATCGCGTGGAACGGTGTGAGGTTTACGGTA AATGGCGCGCGCGTATGAGCATGGCAGGGTTTAAGTTGAAACCGCTGAGTCAGAACGTTGCCGAGTCAATAAAGTCTCGACTCGCCATGGTTAATAGCCG TGTCAACTCGGGACTCACTGTGAAAGAAGAGAATGGCGCTATTTGCTTTGGTTGGATGGGACGAACACTCACAGTGGCATCTGCGTGGCGTTAACATCGT TCACTTTTTTTTTTCTCTATTTTTTATTTTGTTCTGAATATTATTTGTGAAATTGTTACTATATTTAACGTTATCTAGATAATGGAAAGGCAAAGAAAAT TTATTCACGAAAATTGTTATTATAAAAAATGCGTGATGACAAAGATAGCGGTAAATGTTATATATCAAGCCATATCTCCTCTAACATAAATGTTAGTGGT ATAAAATTGAGCAATGGTATATCATTTTACACAATTAAATTCTCGATAACATATATTATATGTAATCTAGTTATTAATTTAATATAAAGTGTTATTTTGT GATAGTTGTTATTTTTTATTGTGTAAGAGAACATATCATTTCTACATAAAAATGTGTACACATATCTTGTAAGTGTTTTTTTATCACCGATAAAATAAGT AATACAAATAAATGAATGAGGATGATGTACTTATTATATATGAATTTTTATATTAGCAGTGTATAAATATTATTCTCATTCGTGTTTATTGTACCAAATA TGAACAAATAAAGAAGTGTTTGGATTCTTGAAAATTTATGATTGCGTGATATGCATTTATGAATTTTGTTGATGTAGTAGTAGTTGATATACACTTTTTA TGATGATGGTTTGGATGTGTGAAAGGAGTTGGTTGCAGTTTGGTAGATAGCTGACTTATTTGCGTTAAAGAGTGGATGGGAATGCCCATTTACATTACCA ACAAATGGGGGCTCCACTTTATAAGATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_187884; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446567
| Blastp | Scarecrow-like protein 8 from Arabidopsis with 48.1% of identity |
|---|---|
| Blastx | Scarecrow-like protein 8 from Arabidopsis with 47.7% of identity |
| Eggnog | GRAS domain family(ENOG410YA1H) |
| Kegg | Link to kegg annotations (AT5G52510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453194.1) |
| Pfam | GRAS domain family (PF03514.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |