Ll_transcript_446022

• Id Trinity: TRINITY_DN51827_c0_g2_i14
• Name Transcript: Ll_transcript_446022
• Sequence: AATAAAGTTTCAGATTCGATCATGATAAATGAAAATATTCATTAATTATGAATGTTTCAGACTTCGACAGGATTGTGTTAAGAAGATTCAGACACAAAAT TTGATCGTTAGTATTTATAGATTTAGTTATTCACTGTCTTTCTATATTCACACACTCATCGTTGTGTTGGATTCTCACTCACCATTTTTCTTCTCATCAT CCCTCTCTTTCTCTCATAAAACCAAACACGTTTATTTTCAGATCTCAATCGTAGGAGGTAACAACAAACAACAGTTTTCTTTCCTTGCATTTTCTGTCTC ACTGTCTTATTCTTCATCACAATTCCGTTTCTTTTTGTTTACCAAATTTGAACAATACTAGATTCCTTTCCTTTTATGTGATAGATCTGATGCATTTCTA ATTATCTCTTTTCATCTCCAAAATCTCACTCTCTGATTGTAACTGCTCCTTGTTTTATTCTTACTCTTCAACCACACCACACATTTTTTCTTTTATTTCT CAAAATGAGCATTTTTTCTTCTTTTATCATAACAATGGTATTAGGAAGAGTGGTCCAATCGATAAGTAACTCAGTTTCATTTACCTAAAGTGTTAGTGAA TGAAACAAAAAAGATTTGAGTAGAACCTGAATTAGTTCAAGTTGCTTTGTTCTTTATCCAAAATTTTGGACATGGGGTATGTAGAAGATGGTGATGCACC TTTGGATTATGCTTCATTTCAGATTTTTCCAAACCAAAACAGGTATGAAGCATTTGTTTGTAAGGGGAAACTATCCGAGAAAATAGCAGCTGGACAGTTA GAACACTTGTTGCCACATGTACCTGCACTAAATGATTTGTATGCTAAAGGATCTGATGCAAATTTTGATCTAAAATTACCAGAAAATCTGCATGGTGCTG AATGGTTTTCAAAAGTGACTGTAAAAAGGTTCCTGCATGTTGTTACTTCACCAGATTTGGTAAATGTTATCAATACTATCATGGATGAGATGTATCAATT GGAGGATTCAAAAAAATTCCATGTTTCTTTATATGGGAAGCCTCAAGTGAACAATGTGTCATCTGAAACTTCAAAGAATGAACTGTTACGAGCAATTGAT CTAAGACTTACAGCATTGAGGAACAAGTTAGCTGAAACTTTAAACGAAGCTACTGGTGCTACCTGCTCCACTAAAGATATTGCTTATTTAACAAAATTAT CTCAACATTTTGGTGCTACTAATATAGAGCATTCTTTGAGCAAGTTTATTGAACTAAACCAAAAGAGCCAGGATGTTGGTCCCCTGAACAATGAAAAATC ATGTGACGTGTCGAATGATGGTTCAAACAGGTCTGTTAAAAACCTACAGATTTCCAAGCCATTACATTCAGATACTCCGGTTAAGTATGGTGTTTCACCA GCAAAAGCTGCTCAAGTTGAGAGACACAGTCCAACAGAAAGTGAGTCCTCCAACTCAGGCGATGAGGATCAAGCATCTGCTGAGAGGAGTCGCTCTCTCA TAAGATCTGCAACACCCAGAAGGTCAGCATCCCCTATGCGAAGGGTACAAATAGGAAGGGCTGGACCCCGCAAAGCTGCTGCACTAACTATCAAGAGTCT CAGTTATTTTCCTTCTAGAGAGAGGCCAATATCTTATAAAGACGCTGCCGAAGATGACAGTGACAGGGAAATATCTGAACAGCCTCATAAGAAGACAGAA ATTGATGTCAGGAGGATAACTGTGCAAGATGCAATCAGTCTCTTTGAAAGCAAACAGCGGGATGAAACTGCAGATACTCAAAAGAGGAAGTCACTAACAG ATGTTTCTATCAGTACAACTAAATCTGTCTTGAGAAGATGGAGTACAAACAGTGGCATGGGGGAAACCTCTGTTCATGGCCACCCAGAACTTGTTCATGA TGATTCTGTTCCAGTGAGTTCCAATGATGTGGCACATGTTGAGATTCCTAAGAATTCAGAAGTAGGAGTCGTGTCGAATTTTATCTCTGAAAGTCGCAAT AACAACGAGAACACTGTTTGTGATGTAAAACCAGAAATGCAGGAAAATGTAGGTTCTAATACAGTAGATAATCAGGAAGAGACTGGTCCAAAAGTAAGAG AGGATATTGTTGATAAGTTAGCAGTCTCAGAAGAATGGAATAAACGAAAGCAAGCAGAGTTCAACCAGATCCTGAAAAAAATGGTCGAAAGCAAGCCAGT TCTATTTGGAAAGTCCCAGCCCAACAGAAAGCAAAATGTTACATTTGAGCAGAGAGGAGGGTCTTATGATCATTATAAGGAGAAAAGAGATGCAAAACTC AGCCGAGAGAAACCTGGAAAACGAGTAGAAAAGGAAGCACAGTATCAAGAAATGCAGCAGCTACTTGATAAGAAGAAAGCTGAAATGTTATCCAAAAGTT CAAGTGCGACTGAAAAATGTTCTGCAAGGTTGCCCCAGAAATCCCTTAGAAATTCAACTCAATCTGCAAATTCTCCAGAGGAAACTGCTAAACCTTCTGT TACCAAAAAGACTTCATCGAAAACATCACCAATGCCTGCAATTCGTAAGTCTTGGTCAGCAACACCTTCACCAAGGGCTTCTGCAATATCCCCTGCTAAA GCTCGTATTGGAGTTTCATCTGCTAGCACCACCCCAACAGGACGGAAGCCAATGTCAACAGCAGCTGTTCCTCAACCAAGCCCCCAACGGGAAAAATCTC AGCAGCGAAGCAAAAATGAGAAAGAAACTCCGACCAGTAATGTAAGAAGCCTTAAAAGCATGAATGAGAAGCGTCAGCCAGCTGTCCCAGCCAAGAGCAA AGCAATCAAAGCAAAAACAATGACTTCTTCTGGAGAAACCTCGGTTACTTCCAAGATTGGCCTAGGTAACAAGGGAACCAAGAAAAGCAGTGTAGTGCCA TTGGAATCAAAACCATTTTTACACAAGGGTACTCGACCTGTGCCTGGACCTGGTAATCTCAAGAAGAAGAAAATTCCTCCTAAGCTGGACAAACCTCTCA GAGACAGTGAAGATCTAATTAAAGATCAAGAAAGTGAGTTGGTTGTCAATGCTTCTGACTTGGTCAGTCAGCATTCAGAAATAGACCAGAATACTGCCAC AGAAACAGAATCTAAGATAAATAACCACTTGCAATGCGATGAGACAAAAAATATAGACCAAAATCGTAGTGAGAATGGTGATGTCTCGACAAATATAGAA GAGTTTTCCTTAAAAATAGCAAATGAAGAAGAATCAACAATATCACCTTCTGCCTGGGTGGATAAGGAAGAGGATCTGGAACTGCCCAAGCCATTCGAGG ATATCACATTTCAACCTGTATTTCAGAGCAGTATTCCTGCAGCAGGATCCACTAGTCCTCGTGTTCGCCATTCTCTGTCACAGATGCTTCAAGAAGAAAC TAGTGAGCCTGAAGCTTGTGAATGGGGAAATGCTGAGAATCCTCCTGTCATGGTATACCAAAAAGATGCACCCAAAGGTTTGAAAAGACTCTTGAAGTTT GCTTGGAATAGCAAGGGAGATGCAGGTTCTTCGGGCAGGTCTAGCCCATCTGTTTTCTCTGCAGAGGATGATGCTGATGAGTTTAAAAATTCTAATAAAA AGAATGCTGATAATCTACCGAGGAAGGGTGCACTCAGTGCCAAAAGCTACGGGGAACCAAAATGTCCAGTACATAACGGATATGAAAGAAACTTAGATGA TGGCAATGGTTCTCACAAGATGCAAAAACGACATTCCGATGCTAGTTCTACCACAAGAGGGTCAAGGTCATTCTTTTCTCTTTCAGCTTATAGGGGAAAC AAACCCTCCGAGTCAAGGTTTCATTAATGCTTTGGAGTAATAAGGCCATTGGCCACATCATCCTTGACAGAGATCACCTTTCTCAACGATATTCCATTTT CTATCCTGAACCAATCAGAATGTTAATTTTTATTTTAAAAAAGTTTCTTTTATTCATATGACAATATTTGATTGGTTCAGGACAAGAAATAAGATACTGT TAATGACAAGTGATCTTTGTCTTGTGTTCATGATGTGTTTAGCATGAAGTTTTCATATTCCTTCTGCTATTTCTTGCATCAGCACATTGTCATACTGATG GTAATAAAAGGATCTGGGTCGATTGAAATGTTGCAAACTCAATAAATTGTATCGTGGAATGTTGTGCCGCTTAGTGGTTAAGAGGTCACACAGAAAATAA CTTGTTCGGTTGCCGATAAAATTGTATAAATTTTCTCTCTAGACGTCACTAAGTGAGAGCCTTATTGATTCTGCCACTTTATAGCTTTTATCCAGGGAGA GGTGGCCCAAAGCATTGAATACTTTAAACATTATTATACTGGTTCAATACATTAAAAATTATACTGG
• Tissue: pods
• Gene name: LI_gene_187901;
• Additional information: details;

Expression of Ll_transcript_446022

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.4
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446022

• Blastp: COP1-interacting protein 7 from Arabidopsis with 25% of identity
• Blastx: COP1-interacting protein 7 from Arabidopsis with 33.98% of identity
• Eggnog: NA(ENOG4111427)
• Kegg: Link to kegg annotations (AT4G27430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430947.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;