Id Trinity | TRINITY_DN51827_c0_g2_i2 |
---|---|
Name Transcript | Ll_transcript_446009 |
Sequence | CACATCCTCACACACATCACATTGCATTTGTCTTTCTTCATTCACACACTTTTACTCTAATAACACTCATCGCTCATCTCACACAAACAGATTTGCGTTG TGGTTGATTCACTTCCTTGTCGGTCTCACTCTCACCCACACCATTCTCAACATCTCTCTCTATCATCACAAAACACGTTCCTTTTCAGATCTCAACCGTA CCAACAGGATCAAGTTGCTATTTTTTGCATCTTAGGTTTTGGAAATGGAGTACGCAATAGAGGGTGATGCGCCTTTGGATTATGCTTCAGTACAGATTTT CCCTAACCAAAACAGGTATGAAGCATTTGTTTTCAAGGGGAAACAATCTGAGAAAGTGGCAGCTGGACAATTGGAACACTTGTTGCCACATATACCTGCA ATGAACGATTTGTACGATAAAGGATGTGATGCAAGCTTTGATCTTAAATTACCAGAAAATCTGCATGGTGCTGAATGGTTCTCAAAGGCGACTGTTAAAA GGTTTCTATCAAAGGGTAGTTTGTTTTTCATTTTTTCCTTTTCATGTTACTGCAGGAAAATCTTACTGACACTCTGATATTATTTTTCCTCCTAGGTTCT TGCATATTATTAGTTCACCAGATTTGGTAAATGATGTGAACATTGTCATGGGTGAGATGTCTCAGTTAGAGGATTCAAAAAAATTCCATGTTTCTATATA TGGGAAGGTGATACTCTGCCTTTCAAAGTTTCAATAAATAAAAAATACCAGATGGGTGTAGTTTCTGGTTGATAGTTGACTTCTGAAATCAGGACCATCA TTTTCACTAAATTGTAGAGTTCATATTGCATATTCATTACACCATTACCAATAAATCAGCTTAATAATCTGATTCTTACTTGAGTATATTGTATTTTATT TCAACTAACAATTTATTGCTAACAGCCTGAAGTGAACAATGCGTCATCCGAAACTTCTAAGTATGTTCTCATGACTATTTCATTACCTTTAGCATATATA GATTGGTTACACTCTCTTTTATGCTTTCTGCAAATATGATGCCAGGAATAAATTGTTGCGAGCAATGGATCTAAGACTGACTGCATTGAAGAGCAAGTTA TCTGAAACTTTAAACAAGGCTGTTGGTGCTGCCTGCTCCACTAAAGATATGGCTTATTTAGCTAAATTTTCTCAACATTTTGGTGCTACTAATATTGAGT AAGTTTTAGACAGATTGATATGTTCATCAACCCTCAGAATTGCAAGCATTAGGTTTTATTTGATTCTATTAAAAGATGAAGTAGATTGCACTTCTACGTT TTCTCTTTTCTCTCTTACTAAAAACATCATATATGTATGTTTTCTCAGGCTATCTATGTGCAAGTTTATAGAACTAAACCAGAAGAGTGAGGATGTTGGT CCCTTGAACAATGAAATAGCATGTGATGTGACGAATGGTGGTGCAAATGGGGCTGTTAAAGGCCTGCAGATTTCTAGGTCATTACATTCAGATTCACCAG TTAAGTATGGTGTTTCACCAGCCAAAGCTGCTCAAGTTGAAAGATATAGTTCGACAGAAAACGAGGAATCTTCCAACTCAAGTGACGAGGGTCAAACATC CGCTGAGAGGAGTCGCTCTCTCATAAGAACTGCAACACCCAGAAGGTCAGCATCCCCCATGCGAAGGGTACAAATAGGAAGAGCTGGACCCCGCAAAGCT GCTGCACTAACTATCAAGAGCCTAAATTTTTTACCTGCTAGAGAGAGGCCAATATCTTTTAGAGATGCCGCCGAAGATGACAGTGATGGGGAAGTATCTG AACAGCCCCATAAGAAGACAGAAATTGATGTCAGGAGGATAACTGTGCAGGATGCTATCAGTCTTTTTGAAAGCAAACAGCGGGATGAAACTACAGGTAC TCAACAGAGGAAGTCATTAACAGATGTGTCTATTAGTACAAATAAATCTGTCTTGAGAAGATGGAGTACAAACAGTGGTATGGGAGAATCCTCTATTCAT GACCAGCCAGAACTTGTTCCTGAAGATCCTATTCCAATGAGTTCCAATGATGTGGCACATGTTGAGATTCCTAAGAATTCAGAAAGAGAAGTGGTGTCTG ATTTTTTTCCTGAAACTCACAATAACATTGAGATCACCGACTGTGATGCAAAATCAGAATGGCAGGAAAATGTAGGTTCTTCTTATACTGTGGATAATCA AGAAGAGACTGATCCTATAGTAAAAGAGGAAATTGTTGATAAGTTAGCAGCCTCAAAAGAATGGAATAAACAAAGGCAAGCAGAGTTGAATCATATTCTT ACAAAAATGGCCGAAAGCAAGCCTGTTCGACTTGGACGGTCCCTGTCCAGCAGAAAGCAAAATATTACATTTGGGCAGAGAGGAGGGTGTTATGATCATT ATAGGGCGAAAAGGGATGCAAAACTGAGCCGACAGAGGTCTGGAAAGCGATTAGAAAAACAAGCACATTTTCAAGAAATGCAGCAATTACTTGAAAAGAA GAAAGCTGAAATGCTATCCAAAACTGAGAGTGCAATTAAAAAAAATTCTGCAAGGTTGCCCCAAAAATCTCTTAGAAATTCAACTCAACCTGCAAATTCT CCAAAGGAAACCTCTGTTATGAAAAAGACGTCATTTAAAACTAAAACATCACCACTACCTGCTACTTGTAAGACTTGGTCAGCAACACCTTCAACAAGGG ATGCTGCAACGCCCCTTACTAAATCTCATAGTGGAATTTCATTTTCTAGAACCACCCCAACACAACGGAAGCCAATGTCAACATCAGCCATTCCTCAACC ACGCTCCCAAAGGGAAAAATCTCAGCAGCAAAGCCGAAATGGGAAAGAAACTCCGACCAGTAATGTCCAGTGCCTTAAAAGCACGAATGGCAAGCGTCAA ACAGTTATCCTAACCAGGAGCAAGGCAATCAAAACAAACATACCGACATCTTCTGGAGAATCCTCTGGTACTTCCAAGATTGGATTTGGTAACAAGGGAA CCAATAAAAACAGTGTAGTTCCATTGGAATCAAAACCATTTCAATGCAAGGGTACTCGGACTGGTACTGAGAATCTTAACAAGAAAAAAAATCCTCCTAA GCTAGACAAACCTCTCAGAGACAGTGAAGATCTAATTGAATATGGAAAAGGTGAATTGGTAGTCAATGCTTCTGATTTGGTCAGTCAGCATTCAGACATG GATCAGAATGCTTCTACAGAACAAGAATACCAGATAAATAACCACCTTCAATTGGATGAAACCGAAAACACAGCAACAAATGAAGAATCAACAATATCTC CTTCTGTCTGGGTTGAGACTGAAGAAGATCTGGATCTGCCTAAACAATTTCAACATGCATTTCCAAGCCGTATTCCTGCAGTGGGATTCACTACTCCTCG AGTTTACCATTCTCTACCACAGATGCTCCAAGAAGAAATTAGCGAACCCGAAACTTGTAAGCAGGGAAATGCCGAGAATCCTCCTGCCACGATATACCAA AGAGATGCACCCAAAGGTTTGAAAAGACTCTTGAAGTTTGCTTGGAATAGCAAGGGAGATGCAGGTTCTTCGGGCAGGTCTAGCCCATCTGTTTTCTCTG CAGAGGATGATGCTGATGAGTTTAAAAATTCTAATAAAAAGAATGCTGATAATCTACCGAGGAAGGGTGCACTCAGTGCCAAAAGCTACGGGGAACCAAA ATGTCCAGTACATAACGGATATGAAAGAAACTTAG BLAST |
Tissue | pods |
Gene name | LI_gene_187901; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446009
Blastp | - |
---|---|
Blastx | COP1-interacting protein 7 from Arabidopsis with 28.57% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416891.1) |
Pfam | - |
Rfam | - |
GO | - |