Id Trinity | TRINITY_DN51827_c0_g2_i22 |
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Name Transcript | Ll_transcript_446031 |
Sequence | AATAAAGTTTCAGATTCGATCATGATAAATGAAAATATTCATTAATTATGAATGTTTCAGACTTCGACAGGATTGTGTTAAGAAGATTCAGACACAAAAT TTGATCGTTAGTATTTATAGATTTAGTTATTCACTGTCTTTCTATATTCACACACTCATCGTTGTGTTGGATTCTCACTCACCATTTTTCTTCTCATCAT CCCTCTCTTTCTCTCATAAAACCAAACACGTTTATTTTCAGATCTCAATCGTAGGAGGTTCAAGTTGCTTTGTTCTTTATCCAAAATTTTGGACATGGGG TATGTAGAAGATGGTGATGCACCTTTGGATTATGCTTCATTTCAGATTTTTCCAAACCAAAACAGGTATGAAGCATTTGTTTGTAAGGGGAAACTATCCG AGAAAATAGCAGCTGGACAGTTAGAACACTTGTTGCCACATGTACCTGCACTAAATGATTTGTATGCTAAAGGATCTGATGCAAATTTTGATCTAAAATT ACCAGAAAATCTGCATGGTGCTGAATGGTTTTCAAAAGTGACTGTAAAAAGGTTCCTGCATGTTGTTACTTCACCAGATTTGGTAAATGTTATCAATACT ATCATGGATGAGATGTATCAATTGGAGGATTCAAAAAAATTCCATGTTTCTTTATATGGGAAGCCTCAAGTGAACAATGTGTCATCTGAAACTTCAAAGA ATGAACTGTTACGAGCAATTGATCTAAGACTTACAGCATTGAGGAACAAGTTAGCTGAAACTTTAAACGAAGCTACTGGTGCTACCTGCTCCACTAAAGA TATTGCTTATTTAACAAAATTATCTCAACATTTTGGTGCTACTAATATAGAGCATTCTTTGAGCAAGTTTATTGAACTAAACCAAAAGAGCCAGGATGTT GGTCCCCTGAACAATGAAAAATCATGTGACGTGTCGAATGATGGTTCAAACAGGTCTGTTAAAAACCTACAGATTTCCAAGCCATTACATTCAGATACTC CGGTTAAGTATGGTGTTTCACCAGCAAAAGCTGCTCAAGTTGAGAGACACAGTCCAACAGAAAGTGAGTCCTCCAACTCAGGCGATGAGGATCAAGCATC TGCTGAGAGGAGTCGCTCTCTCATAAGATCTGCAACACCCAGAAGGTCAGCATCCCCTATGCGAAGGGTACAAATAGGAAGGGCTGGACCCCGCAAAGCT GCTGCACTAACTATCAAGAGTCTCAGTTATTTTCCTTCTAGAGAGAGGCCAATATCTTATAAAGACGCTGCCGAAGATGACAGTGACAGGGAAATATCTG AACAGCCTCATAAGAAGACAGAAATTGATGTCAGGAGGATAACTGTGCAAGATGCAATCAGTCTCTTTGAAAGCAAACAGCGGGATGAAACTGCAGATAC TCAAAAGAGGAAGTCACTAACAGATGTTTCTATCAGTACAACTAAATCTGTCTTGAGAAGATGGAGTACAAACAGTGGCATGGGGGAAACCTCTGTTCAT GGCCACCCAGAACTTGTTCATGATGATTCTGTTCCAGTGAGTTCCAATGATGTGGCACATGTTGAGATTCCTAAGAATTCAGAAGTAGGAGTCGTGTCGA ATTTTATCTCTGAAAGTCGCAATAACAACGAGAACACTGTTTGTGATGTAAAACCAGAAATGCAGGAAAATGTAGGTTCTAATACAGTAGATAATCAGGA AGAGACTGGTCCAAAAGTAAGAGAGGATATTGTTGATAAGTTAGCAGTCTCAGAAGAATGGAATAAACGAAAGCAAGCAGAGTTCAACCAGATCCTGAAA AAAATGGTCGAAAGCAAGCCAGTTCTATTTGGAAAGTCCCAGCCCAACAGAAAGCAAAATGTTACATTTGAGCAGAGAGGAGGGTCTTATGATCATTATA AGGAGAAAAGAGATGCAAAACTCAGCCGAGAGAAACCTGGAAAACGAGTAGAAAAGGAAGCACAGTATCAAGAAATGCAGCAGCTACTTGATAAGAAGAA AGCTGAAATGTTATCCAAAAGTTCAAGTGCGACTGAAAAATGTTCTGCAAGGTTGCCCCAGAAATCCCTTAGAAATTCAACTCAATCTGCAAATTCTCCA GAGGAAACTGCTAAACCTTCTGTTACCAAAAAGACTTCATCGAAAACATCACCAATGCCTGCAATTCGTAAGTCTTGGTCAGCAACACCTTCACCAAGGG CTTCTGCAATATCCCCTGCTAAAGCTCGTATTGGAGTTTCATCTGCTAGCACCACCCCAACAGGACGGAAGCCAATGTCAACAGCAGCTGTTCCTCAACC AAGCCCCCAACGGGAAAAATCTCAGCAGCGAAGCAAAAATGAGAAAGAAACTCCGACCAGTAATGTAAGAAGCCTTAAAAGCATGAATGAGAAGCGTCAG CCAGCTGTCCCAGCCAAGAGCAAAGCAATCAAAGCAAAAACAATGACTTCTTCTGGAGAAACCTCGGTTACTTCCAAGATTGGCCTAGGTAACAAGGGAA CCAAGAAAAGCAGTGTAGTGCCATTGGAATCAAAACCATTTTTACACAAGGGTACTCGACCTGTGCCTGGACCTGGTAATCTCAAGAAGAAGAAAATTCC TCCTAAGCTGGACAAACCTCTCAGAGACAGTGAAGATCTAATTAAAGATCAAGAAAGTGAGTTGGTTGTCAATGCTTCTGACTTGGTCAGTCAGCATTCA GAAATAGACCAGAATACTGCCACAGAAACAGAATCTAAGATAAATAACCACTTGCAATGCGATGAGACAAAAAATATAGACCAAAATCGTAGTGAGAATG GTGATGTCTCGACAAATATAGAAGAGTTTTCCTTAAAAATAGCAAATGAAGAAGAATCAACAATATCACCTTCTGCCTGGGTGGATAAGGAAGAGGATCT GGAACTGCCCAAGCCATTCGAGGATATCACATTTCAACCTGTATTTCAGAGCAGTATTCCTGCAGCAGGATCCACTAGTCCTCGTGTTCGCCATTCTCTG TCACAGATGCTTCAAGAAGAAACTAGTGAGCCTGAAGCTTGTGAATGGGGAAATGCTGAGAATCCTCCTGTCATGGTATACCAAAAAGATGCACCCAAAG GTTTGAAAAGACTCTTGAAGTTTGCTTGGAATAGCAAGGGAGATGCAGGTTCTTCGGGCAGGTCTAGCCCATCTGTTTTCTCTGCAGAGGATGATGCTGA TGAGTTTAAAAATTCTAATAAAAAGAATGCTGATAATCTACCGAGGAAGGGTGCACTCAGTGCCAAAAGCTACGGGGAACCAAAATGTCCAGTACATAAC GGATATGAAAGAAACTTAGGTACTAGTAGTGCATTTCCCTTTTTGTTTTTCTATTCTCTCTTTTTTTTGTGTTTTGGTTTTAATTTATTTTCCATTCTCA TTGAAATCTGATGGCAGTGCAGTAAATTTTGAAAGAAACTTAGAGTAGATAGTTTTTGAAAACCTCAAAATTAGAACCTTTCTGTGCTGAAATATTGCCA GCTTCACCTCATATAAATTGTAACATACAAGTCAACAAACTATGCTCAACTTGATGCTTAATTTAGCTTGAAATGAAGTTTCAGTTATTTGGGGCATATC TTAATCAAATTTCTGACAATTCTTAACTGTAGCATTCTTGATTACTCGGAACTTATTGGGGAACATAGTGTAAAAGAGATAGACCTACCCGAATTTTATG TTAGTGAAAGATGGTCGGATTCGTAGGTAGTCAAGAGATGTGTGTAGAAGACATGTAAAAGCTCTATAAGGACAGTAGATTAGATGGAGCGTAGTTCAAT TGCTAGAGTTAGAGGGAGACCAAGAAAAATTAAATGCGAAACTATTAAAGAGAATTAAAATGTAACTATTTGTCTATAGACAATTTATGACGCGACACTA TATAATTTGATCCATGTACCTTGAATGATGTTGCTCTCATTCTGCTGTCTTTTATGTTACTCTTTACTTATTGAAAGTTAGCAAGTTATGCTTTTTATAT TGAGAGCCCTTCACAATATTCCTATGATTTATCATTTATTTCTGCTATGAAGATGATGGCAATGGTTCTCACAAGATGCAAAAACGACATTCCGATGCTA GTTCTACCACAAGAGGGTCAAGGTCA BLAST |
Tissue | pods |
Gene name | LI_gene_187901; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446031
Blastp | COP1-interacting protein 7 from Arabidopsis with 25.36% of identity |
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Blastx | COP1-interacting protein 7 from Arabidopsis with 33.98% of identity |
Eggnog | NA(ENOG4111427) |
Kegg | Link to kegg annotations (AT4G27430) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430947.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |