| Id Trinity | TRINITY_DN51827_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_446015 |
| Sequence | CACATCCTCACACACATCACATTGCATTTGTCTTTCTTCATTCACACACTTTTACTCTAATAACACTCATCGCTCATCTCACACAAACAGATTTGCGTTG TGGTTGATTCACTTCCTTGTCGGTCTCACTCTCACCCACACCATTCTCAACATCTCTCTCTATCATCACAAAACACGTTCCTTTTCAGATCTCAACCGTA CCAACAGGATCAAGTTGCTATTTTTTGCATCTTAGGTTTTGGAAATGGAGTACGCAATAGAGGGTGATGCGCCTTTGGATTATGCTTCAGTACAGATTTT CCCTAACCAAAACAGGTATGAAGCATTTGTTTTCAAGGGGAAACAATCTGAGAAAGTGGCAGCTGGACAATTGGAACACTTGTTGCCACATATACCTGCA ATGAACGATTTGTACGATAAAGGATGTGATGCAAGCTTTGATCTTAAATTACCAGAAAATCTGCATGGTGCTGAATGGTTCTCAAAGGCGACTGTTAAAA GGTTCTTGCATATTATTAGTTCACCAGATTTGGTAAATGATGTGAACATTGTCATGGGTGAGATGTCTCAGTTAGAGGATTCAAAAAAATTCCATGTTTC TATATATGGGAAGGTGATACTCTGCCTTTCAAAGTTTCAATAAATAAAAAATACCAGATGGGTGTAGTTTCTGGTTGATAGTTGACTTCTGAAATCAGGA CCATCATTTTCACTAAATTGTAGAGTTCATATTGCATATTCATTACACCATTACCAATAAATCAGCTTAATAATCTGATTCTTACTTGAGTATATTGTAT TTTATTTCAACTAACAATTTATTGCTAACAGCCTGAAGTGAACAATGCGTCATCCGAAACTTCTAAGAATAAATTGTTGCGAGCAATGGATCTAAGACTG ACTGCATTGAAGAGCAAGTTATCTGAAACTTTAAACAAGGCTGTTGGTGCTGCCTGCTCCACTAAAGATATGGCTTATTTAGCTAAATTTTCTCAACATT TTGGTGCTACTAATATTGAGCTATCTATGTGCAAGTTTATAGAACTAAACCAGAAGAGTGAGGATGTTGGTCCCTTGAACAATGAAATAGCATGTGATGT GACGAATGGTGGTGCAAATGGGGCTGTTAAAGGCCTGCAGATTTCTAGGTCATTACATTCAGATTCACCAGTTAAGTATGGTGTTTCACCAGCCAAAGCT GCTCAAGTTGAAAGATATAGTTCGACAGAAAACGAGGAATCTTCCAACTCAAGTGACGAGGGTCAAACATCCGCTGAGAGGAGTCGCTCTCTCATAAGAA CTGCAACACCCAGAAGGTCAGCATCCCCCATGCGAAGGGTACAAATAGGAAGAGCTGGACCCCGCAAAGCTGCTGCACTAACTATCAAGAGCCTAAATTT TTTACCTGCTAGAGAGAGGCCAATATCTTTTAGAGATGCCGCCGAAGATGACAGTGATGGGGAAGTATCTGAACAGCCCCATAAGAAGACAGAAATTGAT GTCAGGAGGATAACTGTGCAGGATGCTATCAGTCTTTTTGAAAGCAAACAGCGGGATGAAACTACAGGTACTCAACAGAGGAAGTCATTAACAGATGTGT CTATTAGTACAAATAAATCTGTCTTGAGAAGATGGAGTACAAACAGTGGTATGGGAGAATCCTCTATTCATGACCAGCCAGAACTTGTTCCTGAAGATCC TATTCCAATGAGTTCCAATGATGTGGCACATGTTGAGATTCCTAAGAATTCAGAAGGGGGAGTGGTGTCTGATTTTATTTCCGAAAGTCACAATAAAAAT GAGACCACTGATTGTGATGTCAAATCAGAAAGGCAGGAAAATGTAGGTTCTTATAATGTAGATAATCAAGAAGAGACTGATCCCATAGTAAGAGAGGAAA TTGTTGATAAGTTAGAAGCCTCAGAAGAATGGAATAAACGAAAACAAGCAGAGTTCAACCAGATTTTAAAAAAAATGGTTGAAAGCAAGCCTGTTCTATT TGGAAAGTCCCAGCCCAGCAGAAAGCAAAATAATAAATTTGAGCAGCGAGGAGGGTCATATGATCACTATAAGGAGAAAAGGGATGCAAAACTCAGACAA GAGAAGCCTGGAAAACGAGTAGAAAAGGAAACACAATTTCAAGAAATGCAGCAACTGCTTGATAAGAAGAAAGCTGAAATGTTATCCAAAAGTGGCAGTG AAACTAAAAAAACTTCTACAAGGTTGCCCCAAAAATCTCTTAGAAATTCAACTCAACCTGCAAATTCTCCTAAGGAAACTGCTAAACCTTCTGTTACCAA GAAGACTTCATCTAAAACATCATTAATGCCTGCTACTCGTAAGTCTTGGTCAGCAACACCTTCTCCAAGGGCTGTTGCAACTTCTCCTGCTAAAGCTCGT AGTGGAATTTCATCTGCTAGCACCACCCCTATACGAAGGAAGCCAATGTCAACAACAGTTATTCCTCAACCAATCCCCCAAAGGGACAAATCTCTGCAAC CAAGCAGAAATGACAAAGAAACTCAGTCCAATAATGCCAGGAGCCTTAAAAGCACAAATGAGAAGCGTCAACCAGCTGTCCCAACCAAGAGCAATGCAAT CAAAGCAAAAATAACGACATCTTCTGGAGAAACCTCTGTTACTTCAAAGATTGGCTTAGGTAACAGGGGAACCAAGAAAAGCAGTGTAGTGCCATTGGAA TCAAAACCATTTCTACGCAAGGGTACTCGAACTGGGCCTAGTAATATTAACAAGAAAAAAAGTCCGCTTAAGCTGGACAAACCTCTCAGAGAGAGTGAAG ATCTAATTGAAGATCAAGAAAGTGAGTCAGTTGTCAATGCTTCTGACCTTGTCAGTCAGCATTCAGATAGGAACCAGAATACTGCTACTGAACCAGAATC TCAGATGCGTAGCCACCTGCTATGCGATGGGATCGAAAACTTAGACCAAGATCATAATGAGAGTGGTGATATTTTGAAAGATATAGAAGAGTCTTCCTTA AAAATAGCAAATGAAGAAGAATCAACAATATCACCTTCTGCCTGGGTGGAGACAGAAGAGGATCTTGAAATGCCCAAGCTATGTGAGGATATTACATTTC AACCAGCATTTTCGAGCAATATTCCTGCAGCAGGATCCACTAGTCCTCGTGTTCGCCATTCTCTGTCACAGATGCTTCAAGATGAAATTAGCGAACCTGA AACTTGTGAGTGGGGAAATGCTGAGAATCCTCCTGCCATGATATACCAAAAGGATGCACCAAAAGGTTTGAAAAGACTCTTGAAATTTGCTCGGAAGAGC AAAGGAGATGCAGGTTCTTCTGGCTGGTCTAGTCCATCTGTTTTCTCTGAAGGAGAGGATGATGCTGAGGAGTTTAAAAATTCTAATAAAAGGAATGCTG ACAATCTACTGAGAAAGGCAGCACTCAATGCAAAAAGCTATGGGGAACCAAAAAGTTCAGGACATGAAGTATATGAAAGAAACTTAGCAAGCAGAGATGA TGGCAAGGGTTCTCACAAGATGCACGAAGGCCGTGACTCAAGTACAGGTCCTACCACAAGAGGGTCAAGGTCATTCTTTTCTCTTTCAGCTTTCAGGGGA AACAAACCCTCTGAGTCAAGGTTTCATTAATGCCATGGAGTATTCTATAAAGATCATTGACTTTGCCATCATTCTAGGATGTGTTCATGTCAGGTTTAGC ATGGAGTTTTCCCTATTCTTTTTGCTACTTCTTGCATCAACACATTTTAATTTCAATAAAAGAAAGGGGTTGGATTGGAATGTTATGAATTCATTAGGTT GCATTGTGGTATTTTGTTACGTTGCCCTTATTCATTGTTGCAATGTTGTCCCAAAAAATATGTCATGAACATACCGATGGTTACAATCTCCGGAAGTTGC ACCGAACTGGGCTCTGATTAATCACTCTGCAAAATATGATATAAGACAAACTGCATCAGATTGAATAGCTTAGAGCAAGTTTTGGTTGTTTTCTGTTTTC ATTGTCAATTGATATCTTTCAATACAAATTACAAAGTGTCATCTTATTTTAATTTTTCTGTTTTCAAAATTTTGTAAAAGAAATAACAAAATTAAGGGAA AATTGCACTGACCTTCCATGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_187901; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446015
| Blastp | - |
|---|---|
| Blastx | COP1-interacting protein 7 from Arabidopsis with 30.1% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416891.1) |
| Pfam | - |
| Rfam | - |
| GO | - |