Id Trinity | TRINITY_DN51829_c1_g2_i13 |
---|---|
Name Transcript | Ll_transcript_447901 |
Sequence | TGTCAAGAATGCATGTGCTTTCCTGGGAGATGGAATGTCTAGGATTGAATGCATCCGGAGCATTAGCCTTGGACAGCATTTTGACAATCTAAAGTTGCTC CTTGCTCCGAAATTGTTTTCCCTTTCAGAAATTGGAACCTGTTGTTCATGGTAGAGGGAGGAAAACTGATACCTTAGATGAGACCTACTTAGGGGTCCAT GAGGAGCTGTTATATGCTCGGAAAATTAACCCCGTGGAAGGAGCTCAATGGACTGGGATAGTAACAACTATTGCTATAGAAATGCTCAAATCAGGCATGG TTGAAGCTGTCGTTTGTGTACAAAGTGATCCGGATGACAGATTGGCTCCAAGACCCGTTTTGGCAAGGACACCGGAGGAAGTGTTGGCTGCTAAAGGTGT TAAGCCAACATTGTCACCCAACCTCGATACCCTCGCTCTTGTTGAGGCTGCAGGCGTCAAGCGTCTTCTGTTCTGTGGTGTAGGATGCCAGGTGCAAGCA TTAAGATCTGTGGAGCGCCACTTGAATTTGGATAAGCTCTATGTTTTGGGCACAAATTGCGTGGACAACGGAACTAGGGATGGACTGGATAAGTTTCTAA ACGCTGCGAGTCATTCACCAGAAACAGTTCTCCATTACGAGTTTATGCAAGATTACAAGGTTCACTTGAAGCATTTGGATGGTCATATTGAAGAGGTTCC TTATTTCTGTCTACCGGCAAATGAGTTGGTTGATGTTATTGCCCCATCTTGCTACAGCTGTTTTGACTATACAAATGCTTTAGCAATGCCTCATATTACT TCAATCCACACATGAAAACCTATGTTGTTTTTAATTATTGTACCTGAGTGTGAAATGTGAAGTAGCTTTGTTCATTGCCGTATCCTTGGTAGACTAATTT TGGATTTGGTGGTTGGATACATGGGTGTGCCTAAATATTCTGGAATCAGCATGACACAACATCCACAGTATGTTACAGTCAGG BLAST |
Tissue | pods |
Gene name | LI_gene_187918; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447901
Blastp | 7-hydroxymethyl chlorophyll a reductase, chloroplastic from Arabidopsis with 90.48% of identity |
---|---|
Blastx | 7-hydroxymethyl chlorophyll a reductase, chloroplastic from Arabidopsis with 72.82% of identity |
Eggnog | Coenzyme F420 hydrogenase(COG1035) |
Kegg | Link to kegg annotations (AT1G04620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413708.1) |
Pfam | Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term (PF04422.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |