| Id Trinity | TRINITY_DN51837_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_448244 |
| Sequence | AAAAAAAAGTTGCATGCAATTCCGTGTTAACAAGAGGAGAGGATATATTAATTTGAGAAAACCAGCTCAGCACAAACCCCTAAATCTCTATAAACCCTAA AACCCGATTCTTCTAGACCCTTCTCCTCTGTTTCAAAAACCCACCACCACTACCCATTCCCCATTCACTTTCTCACTCTCTTTCTCTGCTTCTTCACTCT CTCTTCCATTTCCCCATTTCTCCATTCAATCATGTATCGCTTTGCTTCAAACCTCGCCTCTAAGGCTAGGGTTGCTAGGAACATTAGCCAACAGGTTGGT GGAAGTAGGTTGAATTGGAGCAGAAACTATGCAGCCAAAGAGATTAAATTTGGCGTTGAGGCTCGGGCTTTGTTGCTTAAGGGTGTTGAAGATCTTGCTG ATGCGGTCAAAGTAACCATGGGTCCTAAGGGGCGCAATGTGGTGATCGAGCAAAGTTGGGGTGCCCCAAAAGTGACTAAAGATGGAGTAACTGTTGCAAA GAGCATTGAATTCAATGATAAAATTAAGAATATTGGTGCCAGTCTTGTAAAGCAGGTTGCAAATGCTACCAATGATGTGGCTGGTGATGGAACCACATGT GCTACCGTCCTTACACGAGCAATATTTACCGAAGGCTGCAAGTCAGTTGCAGCTGGAATGAATGCAATGGACTTGAGGCGTGGTATAACTCTGGCTGTTG ATGCTGTTGTAACAAACTTGAAAAGCAGGGCACGGATGATTAGCACATCTGAAGAAATAGCTCAGGTTGGGACAATATCAGCTAATGGTGAGAGAGAAAT TGGTGAGTTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGAGTAATCACTATCGCAGATGGCAAGACTTTGGACAATGAGTTAGAAGTCGTTGAA GGAATGAAACTTGACAGGGGATACATATCTCCTTATTTCATAACAAACCAGAAGAACCAGAAATGTGAACTCGAGGATCCTCTCATTCTGATCCATGAGA AGAAAATTTCAAGTATACAATCTATAGTTAAAGTTTTAGAGTTGGCTTTGAAGAGACAAAGACCTTTGTTGATTGTAGCCGAGGATGTGGAAAGTGATGC ACTGGCAACTCTTATTCTAAATAAGCTCCGTGCAGGGATTAAGGTCTGTGCTATTAAAGCCCCTGGATTTGGTGAAAACAGGAAAGCAGGCCTCCAAGAT CTTGCAATTCTTACAGGAGGAGTTCTTATCAATGAAGAGCTTGGCCTGAATCTTGAGAAAGTGGATTTGGATACGCTTGGTACTTGCAAAAAGGTAACAG TTTCTAAGGATGACACCGTCATTCTTGACGGAGCAGCTGACAAGAAAGCCCTTGAGGAAAGATGTGAACAGATTAGGTCAGCAATTGAAAATAGCACTTC AGATTATGACAAGGAAAAGTTACAGGAAAGATTGGCCAAGCTTTCTGGGGGTGTTGCAGTGCTTAAGATTGGAGGTGCCAGTGAGGCTGAAGTTGGCGAG AAGAAGGATAGAGTGACAGATGCCTTGAATGCAACTAAGGCAGCTGTCGAGGAGGGCATAGTGCCAGGTGGTGGTGTTGCTCTTCTCTATGCATCGAAAG AGTTGGATAAACTTCAAACTGCCAACTTTGACCAAAAGATTGGTGTTCAGATTATCCAAAATGCCTTGAAGACACCAGTACACATAATTGCATCAAATGC GGGAGTTGAGGGTGCTGTTGTCGTTGGCAAACTATGGGAACAAGATAACCATGACCTTGGGTATGATGCAGCCAAAGGTCAGTTTTCCCTTTCTCTTTTC TTGTTTCTGTCTAATTTCCAAAGACCCTTTTAAAGAGATTAGAATATATCTTGCAAATGACCGATCCGACATCATATTTGTTTTTCTCCGGCTTCACATC CAGGTGAATATGTTGATATGATTAAAGCTGGAATCATAGACCCATTGAAGGTGATTAGAACAGCCTTAGTTGATGCAGCCAGTGTGTCATCTTTGATGAC AACAACAGAAGCTGTTATTGCTGAACTTCCAAAGGATGAAAAATCTGCTCCATCTATTCCACAAGGCATGGGTGGAATGGGTGGCATGGATTTCTAATCA GGTTTTTACTTTTGAATACAGAGAGTGTTGCTGAACTGAACCCATTTATAGTATTGTTGTTTCAATTGTTAATTGTTGTGAGTAGGCATCAATGTAATCA GTGAGAGAGTTATTGATTATAGATGTAGGATAACAAAATGCAACTTGCAATAATTCCAATACCAAGATGTTTGGAACAATGTTCAAGGAATTTGAGATGA ATTGGAATTGGCCATTCATATTTTAATTATGACTTTTGAAAAATGAAAACTTTCAATTTTATATATCAACATTTCTTACTAGCACTATACCTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_187972; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448244
| Blastp | Chaperonin CPN60-2, mitochondrial from Cucurbita with 90.54% of identity |
|---|---|
| Blastx | Chaperonin CPN60-2, mitochondrial from Cucurbita with 84.38% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001044) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449999.1) |
| Pfam | TCP-1/cpn60 chaperonin family (PF00118.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |