Ll_transcript_448228

• Id Trinity: TRINITY_DN51837_c0_g1_i6
• Name Transcript: Ll_transcript_448228
• Sequence: AAAAAAAAGTTGCATGCAATTCCGTGTTAACAAGAGGAGAGGATATATTAATTTGAGAAAACCAGCTCAGCACAAACCCCTAAATCTCTATAAACCCTAA AACCCGATTCTTCTAGACCCTTCTCCTCTGTTTCAAAACCCCACCACCTCTCTCTTACTTCCCCATTCACAATTTTCATTTCTCATCATTCTCTTTTCTT CTTTACACTGTTCCATTCCTCACTACTCAATCAATCATGTACCGCTTTGCTTCAAACCTTGCATCTAAAGCTAGGGTTGCTAGGAACATCACCCAACAGT TTGGTGGAAGTAGGTTGAGTTGGAGCAGAAACTATGCGGCCAAAGAAGTTAAGTTCGGTGTCGAGGCTCGAGCTTTGATGCTCAAGGGTGTTGAAGATCT TGCAGATGCTGTGAAAGTAACCATGGGTCCTAAGGGGCGTAATGTGGTGATTGAGCAAAGTTGGGGTGCCCCTAAAGTGACAAAAGATGGAGTAACTGTT GCGAAGAGCATTGAATTCAATGATAAAATTAAGAATATTGGTGCCAGTCTTGTAAAGCAAGTTGCAAATGCTACCAATGATGTTGCTGGTGATGGAACCA CATGTGCTACTGTACTTACCCGAGCAATATTTACTGAAGGCTGCAAGTCAGTTGCAGCTGGAATGAATGCAATGGACTTGAGGCGTGGTATAACTTTGGC TGTTGATGCTGTGGTGACAAACTTGAAAAGCAGGGCACGGATGATTAGCACATCTGAGGAAATAGCTCAGGTGGGGACAATATCAGCTAATGGGGAGAGA GAAATTGGCGAGTTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGAGTAATCACTATCCAAGATGGCAAGACTTTATACAATGAGTTGGAAGTTG TTGAAGGAATGAAGCTTGACAGGGGGTACATATCTCCTTATTTCATAACAAACCAGAAGAACCAAAAATGTGAACTCGATGATCCTCTCATTTTGATTCA TGAGAAGAAAATCTCAAGTATACAATCTGTAGTTAAAGTATTAGAGTTGGCTTTAAAGAAACAAAGACCTTTGTTGATTGTTGCCGAGGATGTTGAAAGT GATGCATTAGCAACTCTTATTTTAAATAAGCTCCGTGCTGGAGTCAAGGTATGTGCCATTAAAGCCCCTGGATTCGGTGAAAATAGGAAATCAGGCCTCC AAGATCTTGCAGTTCTTACAGGAGGATCTGTTATCACTGAAGAGCTGGGCTTGAATCTTGAGAAAGTGGATTTGGATTTGCTTGGTACATGCAAAAAGGT AACAATTTCCAAGGATGACACTGTCATTCTTGACGGAGCAGCCGACAAGAAAGCCCTTGAGGAAAGATGTGAGCAGATTAGGTCAGCAATTGATAATAGC ACCTCAGATTATGACAAGGAAAAATTACAGGAAAGATTAGCCAAGCTTTCCGGGGGTGTTGCAGTGCTTAAGATCGGAGGAGCCAGTGAGGCGGAAGTTG GCGAGAAGAAGGATAGAGTGACAGATGCCTTGAATGCAACTAAGGCAGCTGTCGAGGAGGGCATAGTGCCAGGTGGTGGTGTTGCTCTTCTCTATGCATC GAAAGAGTTGGATAAACTTCAAACTGCCAACTTTGACCAAAAGATTGGTGTTCAGATTATCCAAAATGCCTTGAAGACACCAGTACACATAATTGCATCA AATGCGGGAGTTGAGGGTGCTGTTGTCGTTGGCAAACTATGGGAACAAGATAACCATGACCTTGGGTATGATGCAGCCAAAGGTCAGTTTTCCCTTTCTC TTTTCTTGTTTCTGTCTAATTTCCAAAGACCCTTTTAAAGAGATTAGAATATATCTTGCAAATGACCGATCCGACATCATATTTGTTTTTCTCCGGCTTC ACATCCAGGTGAATATGTTGATATGATTAAAGCTGGAATCATAGACCCATTGAAGGTGATTAGAACAGCCTTAGTTGATGCAGCCAGTGTGTCATCTTTG ATGACAACAACAGAAGCTGTTATTGCTGAACTTCCAAAGGATGAAAAATCTGCTCCATCTATTCCACAAGGCATGGGTGGAATGGGTGGCATGGATTTCT AATCAGGTTTTTACTTTTGAATACAGAGAGTGTTGCTGAACTGAACCCATTTATAGTATTGTTGTTTCAATTGTTAATTGTTGTGAGTAGGCATCAATGT AATCAGTGAGAGAGTTATTGATTATAGATGTAGGATAACAAAATGCAACTTGCAATAATTCCAATACCAAGATGTTTGGAACAATGTTCAAGGAATTTGA GATGAATTGGAATTGGCCATTCATATTTTAATTATGACTTTTGAAAAATGAAAACTTTCAATTTTATATATCAACATTTCTTACTAGCACTATACCTTTA AAA
• Tissue: pods
• Gene name: LI_gene_187972;
• Additional information: details;

Expression of Ll_transcript_448228

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 1.8
• PS2: 1.6
• PS3: 0.8
• PW1: 0.7
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448228

• Blastp: Chaperonin CPN60-2, mitochondrial from Cucurbita with 91.12% of identity
• Blastx: Chaperonin CPN60-2, mitochondrial from Cucurbita with 84.87% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001044)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413888.1)
• Pfam: TCP-1/cpn60 chaperonin family (PF00118.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;