Ll_transcript_446125

Id TrinityTRINITY_DN51838_c0_g1_i10
Name TranscriptLl_transcript_446125
SequenceGAATAAGCGAAGGGTGTGTGGATAGCAGTAATCTTCACTAGTTGTAAAATTGTAAGAGATTCATTGCTATACGGAAAATAACGCATAAATAAAACATTTT TTCATTTTCAAAATTTCATTTTATTTCTAAAATCTCAATCTCGTGTCTTCCATTTCACCATCGAATCGAGGGATACAGCAAAAACGGCGATCCAATCCAG CGTTTCTTTTTCACCGAAATCGAAACGCTGTTTCCGAGCATCACTTTCCTTCAGCTATTGTTCCTCGTCAATTCCCAATATTGGAAGGTTTTAATTGTTG ATTCTGGTCTAATCAACTTGTGGAGTTTTAATTCAAGTTCCAAACATATAGAGCCATGAGTTTTGTTTTTGGAGGAACAAGAGCAGATATAGAAAATGGA TTTCCAGGATTTATACCTCAGAGGCGTACATTGGTATGCATGTTGTGTATCGATTATCTGCATGAGTGATCTAATGTTGATGATTTATTGTTTGTGTTTC CCGGTTTTGTAACTAAAAGCATGATTAGATATGTAGCTTGTTTAACATAAACTAAAGCTTCATATATATTCCAACTTTTTCTTCAGCGTGTTCATGCTGC ACGTCCGAGTAATTCCAATTCTCTCACTTTTCTTGTAACAGGTATTAATGTTCTTAGGTATCATGTTTTGTTTTAGCATTTTGTGCAGACCACTTATCTT TTTCTATATCTTTTTTCCCAATCACAACTTCCTGCTTATATGTTCCAGTTCTCCTGTTATTCATGATACTGAACTCTCAACAAATGTCACCAAATTTCAT GCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGTTAAGGATGTACGCGACATTTCAACAGCTTCAAGCGCAGGCCCAAGCTCATGCCGCAACA GCCAATGGCCTTCTTGGACACACAGAACTGCGGTTGCATATGCCACCATCAATAGCACTCACAAGCCGAGGGCGGCTGCAAGGCCTCAGACTTCAGCTTG CACTTCTTGATCGAGAGTTCGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATGTTTCTTCTGGATCTTCAATGACTGAGGAAGAGAT CAATGCTCTTCCTGTCCACAAATACAAGGGTTCTGGTCCCCAAAGCAGTAGTTCCTCAATGCAACAAGCTTCATCTTCCACATCTGCCGAGGTATTAACT TCATCCTTGGTTATTTGTTTTCCCATTTGACATAAAGAAGTAAATTACACTGCATCTTATGGGAACTCCAGTTCTCTCTTTAGGCCTTGAGGGTATTGCC TTCTGCATGTTTTTCCAGTGATTTTCTTGCACTATTCCTGACATTATGGTGAAGTGCTGATACTTGTCAAACTACATTTTATATGTGATGACTGTGAATC TGTGCTATAAATATTCAGCAGTACAGCATATTTATCCTGGACCTGGTTGAGTACTTCAAAATTTGGCAATAACATTTATATTAGAGTAAATTACATTGAC ATCTTTGAGATTTAGTCAAACTACACATGTCACCCCTCCCTTTCTTACTCCTACACAAACATCCTTTAATTTATGTGCATCCATTACGCCCTGTACCCCA ACCAGGGACGGTGAGTGTAATGTTTGTAATGAATCTAATTTACTTTATGTATTATTTTCTTGAATATCTTATCATTTACATCCATTGATCCACCATTGTA TATTCATATAAATTCACTGGAACTGTCCACTGTCTGATGTTTTCATGGGACTGTTAAATAACAGAAAGGATCGCCAGACATTTACATAGTTAATCTTTTC TTGTTGTGCTTGTAAGTTTTCATATTTTAAGCTGTTATTGTGGAGTGGTCGGTATTTCGTACGAATAATTTATTGGTTTTTTGTGTGGCAGAAGAAGCAA GATCATTCAAACGCAACTGGGAGCATGAAAGTCTCTGATGATGAGCTCACTTGCAGCGTATGTTTGGAGCAAGTTAATGTTGGAGATATACTCCGTAGCT TGCCCTGCTTGCATCAGGTTAGTTATATATTCTAGGAAGTGAAAATGCCAGTTTCACCCTTATTTAGCTTGCCCTGCTTGCCTTAAGTTATTAAACCCAA ATATTTTGGGTTTTTAGTAAAGTAAATATTGGTGCAAGTTGGGTTGGAAACAATCCGAACCTGGATTCAACTCGATAAGAATCGGCTTAACTTGAAACTC GACTCGAGGCCGATATCAATTATTTTTCAGCTCGAACTAGACTTTGAGTTCGTGAACTGGTCAACTCATTAGCTTGAGTTGGTTTAGTTCGTTGGGAGAT TGTGAACTGTTTACTTCAACTCATTATTTTGATTGGTTCATTTCATCAGTTCGAATGATGATTATTTATTTAAGATATTAAATTTAAAGATTGTATATAC AATCAAGCTAGTTCATGAGTCTAACGAGTTGAACTGTAATTGGCTCAAGTTCTGCTAGTTTATTTAATGAACTCAATTTTTAGCTCAAGTTCAATTCATT TGGTTAATGAACGAAGCTTATCGAGTTAAATAACAAGTCGAGTTTCAAACGAATGACGAGTTGATTCAGTTTATTATCAGTCCTAGTGGAAGCATGCATA TGCATATGCTAATGAACCAATTATTGACTATTATTTGAAGGACTTGAGTAATCCTAAAGTTTGTCTGAAACGTTGGGGACTTGGGGTTGATTTTATGTTT TTATTTATCAATCTAATGTGATACTGAGACCTCGTTTATGTGTTTTGAAGTTTCACGCTAACTGCATTGATCCCTGGCTGCGGCAACAAGGGACATGCCC TG BLAST
Tissuepods
Gene nameLI_gene_187976; 
Additional informationdetails; 

Expression of Ll_transcript_446125

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_446125
BlastpE3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 77.03% of identity
BlastxE3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 85.27% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT3G55530)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (NP_001242131.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;