Ll_transcript_446105

• Id Trinity: TRINITY_DN51838_c0_g1_i3
• Name Transcript: Ll_transcript_446105
• Sequence: GAATAAGCGAAGGGTGTGTGGATAGCAGTAATCTTCACTAGTTGTAAAATTGTAAGAGATTCATTGCTATACGGAAAATAACGCATAAATAAAACATTTT TTCATTTTCAAAATTTCATTTTATTTCTAAAATCTCAATCTCGTGTCTTCCATTTCACCATCGAATCGAGGGATACAGCAAAAACGGCGATCCAATCCAG CGTTTCTTTTTCACCGAAATCGAAACGCTGTTTCCGAGCATCACTTTCCTTCAGCTATTGTTCCTCGTCAATTCCCAATATTGGAAGGTTTTAATTGTTG ATTCTGGTCTAATCAACTTGTGGAGTTTTAATTCAAGTTCCAAACATATAGAGCCATGAGTTTTGTTTTTGGAGGAACAAGAGCAGATATAGAAAATGGA TTTCCAGGATTTATACCTCAGAGGCGTACATTGCGTGTTCATGCTGCACGTCCGAGTAATTCCAATTCTCTCACTTTTCTTGTAACAGGTATTAATGTTC TTAGGTATCATGTTTTGTTTTAGCATTTTGTGCAGACCACTTATCTTTTTCTATATCTTTTTTCCCAATCACAACTTCCTGCTTATATGTTCCAGTTCTC CTGTTATTCATGATACTGAACTCTCAACAAATGTCACCAAATTTCATGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGTTAAGGATGTACG CGACATTTCAACAGCTTCAAGCGCAGGCCCAAGCTCATGCCGCAACAGCCAATGGCCTTCTTGGACACACAGAACTGCGGTTGCATATGCCACCATCAAT AGCACTCACAAGCCGAGGGCGGCTGCAAGGCCTCAGACTTCAGCTTGCACTTCTTGATCGAGAGTTCGATGATCTAGATTATGAAACTTTAAGAGCTCTG GATTCAGATAATGTTTCTTCTGGATCTTCAATGACTGAGGAAGAGATCAATGCTCTTCCTGTCCACAAATACAAGGGTTCTGGTCCCCAAAGCAGTAGTT CCTCAATGCAACAAGCTTCATCTTCCACATCTGCCGAGGTATTAACTTCATCCTTGGTTATTTGTTTTCCCATTTGACATAAAGAAGTAAATTACACTGC ATCTTATGGGAACTCCAGTTCTCTCTTTAGGCCTTGAGGGTATTGCCTTCTGCATGTTTTTCCAGTGATTTTCTTGCACTATTCCTGACATTATGGTGAA GTGCTGATACTTGTCAAACTACATTTTATATGTGATGACTGTGAATCTGTGCTATAAATATTCAGCAGTACAGCATATTTATCCTGGACCTGGTTGAGTA CTTCAAAATTTGGCAATAACATTTATATTAGAGTAAATTACATTGACATCTTTGAGATTTAGTCAAACTACACATGTCACCCCTCCCTTTCTTACTCCTA CACAAACATCCTTTAATTTATGTGCATCCATTACGCCCTGTACCCCAACCAGGGACGGTGAGTGTAATGTTTGTAATGAATCTAATTTACTTTATGTATT ATTTTCTTGAATATCTTATCATTTACATCCATTGATCCACCATTGTATATTCATATAAATTCACTGGAACTGTCCACTGTCTGATGTTTTCATGGGACTG TTAAATAACAGAAAGGATCGCCAGACATTTACATAGTTAATCTTTTCTTGTTGTGCTTGTAAGTTTTCATATTTTAAGCTGTTATTGTGGAGTGGTCGGT ATTTCGTACGAATAATTTATTGGTTTTTTGTGTGGCAGAAGAAGCAAGATCATTCAAACGCAACTGGGAGCATGAAAGTCTCTGATGATGAGCTCACTTG CAGCGTATGTTTGGAGCAAGTTAATGTTGGAGATATACTCCGTAGCTTGCCCTGCTTGCATCAGGTTAGTTATATATTCTAGGAAGTGAAAATGCCAGTT TCACCCTTATTTAGCTTGCCCTGCTTGCCTTAAGTTATTAAACCCAAATATTTTGGGTTTTTAGTAAAGTAAATATTGGTGCAAGTTGGGTTGGAAACAA TCCGAACCTGGATTCAACTCGATAAGAATCGGCTTAACTTGAAACTCGACTCGAGGCCGATATCAATTATTTTTCAGCTCGAACTAGACTTTGAGTTCGT GAACTGGTCAACTCATTAGCTTGAGTTGGTTTAGTTCGTTGGGAGATTGTGAACTGTTTACTTCAACTCATTATTTTGATTGGTTCATTTCATCAGTTCG AATGATGATTATTTATTTAAGATATTAAATTTAAAGATTGTATATACAATCAAGCTAGTTCATGAGTCTAACGAGTTGAACTGTAATTGGCTCAAGTTCT GCTAGTTTATTTAATGAACTCAATTTTTAGCTCAAGTTCAATTCATTTGGTTAATGAACGAAGCTTATCGAGTTAAATAACAAGTCGAGTTTCAAACGAA TGACGAGTTGATTCAGTTTATTATCAGTCCTAGTGGAAGCATGCATATGCATATGCTAATGAACCAATTATTGACTATTATTTGAAGGACTTGAGTAATC CTAAAGTTTGTCTGAAACGTTGGGGACTTGGGGTTGATTTTATGTTTTTATTTATCAATCTAATGTGATACTGAGACCTCGTTTATGTGTTTTGAAGTTT CACGCTAACTGCATTGATCCCTGGCTGCGGCAACAAGGGACATGCCCTG
• Tissue: pods
• Gene name: LI_gene_187976;
• Additional information: details;

Expression of Ll_transcript_446105

FPKM

• PAB: 0.4
• PNAB: 0.5
• PS1: 0
• PS2: 0.1
• PS3: 0.2
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446105

• Blastp: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 77.03% of identity
• Blastx: E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 85.27% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G55530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (NP_001242131.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;