Ll_transcript_446562

• Id Trinity: TRINITY_DN51840_c0_g1_i26
• Name Transcript: Ll_transcript_446562
• Sequence: ACTTACATGGGAAGAAGCACAGGGCTTGCTTCATCCACCACCTAGTGTCAAGCCAAATGTTGTAACAATTGAGGACCAAGAAATTGAAGAGTATCATGAA CCCCCGGTTATTGGAAAGAGAACTATATTCAATGCCAGTCCAACTGGGTAAGATTAAATTTATTTCATATTTAGAGTTGTATTTTGTTTCAGTAAAAAGT CTCTCTCCTGGTACTGGGTAATGCCAGTTCTTGTTCTTGTTTGTCACTTGATCTTGCCTTCAAATATGTTCGAACAGATAACATTTGCTACTTTTTTTGG TCCATGTATTTTAAGCATTAGTTGTTCATGCTTCTGTTTTTCAAACTCACAATCACTGTCTTAGCTGTAAAATCACAGTGCAATCTTGGAGAAACTTTTA TGACTGCTGTTTTATAAGATTCATCATCTGTCTGTATCACTTGTGTAAACTATTATCCTTAATTTACATCCTTTTTAAAATGTTTTAGGTAATTGATATT TATTGTTGTCATAACTTCAATAGATTAAAGAAATTGAAGTGAATTTCTATGATGCTTTCCATAGTAGGCTTTGCAGAATGGTTTCTAATTTCTTCCATCA TATGGCTCTCTAGTTATTTTGTTGAAGTGGATAATCTTGTGATAAAATTTGGTCATTTATTTGCAGTACATTTTCGTTAATCTCTTGGATAATGTTATTA GAACTAACACGGATCCTTTCCCATTTTATTTAATTGAAAGAAACTCAATTGGAGTTCTTCTTATTTATTCCTAGGCCAGGTTAATTAAGAAGGTAATACA GCAACTGGTTAAGTTGCCAGTGGAATAAGTTAATGGCATGATAACTGCTGGATAATAAGTTTATGGTTTCCTTCTATATTATCCGCAGCTAATATGACTT GGCAAGTATTGGATGCCAAGGTCTGCAAGGATGATTCATAATGGAGAATGGGAATGACTATCTTCAATGTGGTTTTTTAGTTTACTAAAATAAAATTTAC AATTGTTCTTTTGTCAGAGACATGATTATATTCTTGAGAGGCATGTTCTGTTTGGTACTCTTGAGCAAGCTTTGTCCAAATTACTCATTCATCAGAACTA TGCATATTTTTCAAATACTTCTTTTCTTATTTGTTCTATCTATGGTTATGTACTGATTTTCAATAGGAAAATTCTCACAAGAAAGATACTTGTATCAGGA TTCAGCATTATTTCTTATTTAAGATCCATTAGAGCATTTAGACTTGTCTGATTGATGTGGTGGGTGAATGTGCAATTTGTGCGTGAATATGTTATAACTA TTTCATCCAGGAGGAAAGAACAGTGGGCTCACTGTGATGATTGCTCTAAATGGCGCAGGGTTCCAGTAAATGTTCTTCCTCCCAAGTGGACATGTTCTGA TAATGTTTGGGATGCAAGCAGGTCTTTATGTTCTGCACCAGAGGAGCGGAGTAGAATGGAATTAGATGATCTTCTGAGAACCAGCAAAGTTTCTAAGAAG CGGAGAAGGCTAGAAAAGAGCGAGTCAATTGAAGAACATGAGCCCTCTGGCTTAGAAGCTCTTGCCAATGCAGCAGTTTTGGGGGATATTCTTCTTGACC CTGCTGAGCCATCATCTAGAGTCACCACAAAACATCCGAGACACCGTCCTGGCTGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAAGGGAAACA TAAACCAACATGTAACTGCCTTGCATGCATGACAGTGAAGCGCCGATTCAAAACCCTTAAGATGCGCAAGAAGAAATGCCAATCAGAACGTGAAGCAGAT GCATGTGCTTCCCAGAAAGATCAAATCCAGCAATGGGATGAGCCAGATGCCAATAGAGCATCAAAAGATGATACAAGTCAATTAGATCAACCCAGTGCTG CTGCACATATGGATCCGGGTTGTGATCCCAACTGCGAAGACATGCCAGTCGATGATATAGATATTCCGGGACGTAGCGCTTGACCGATCAAAGACAAAAA ATATCTCTTTACCTTTCTACACAGTATAGTTTGCTACCCCTTTCAAAGGGGTGGTTAAACATAGTTTTTCTTTCATACAGAAAACATATAAAATTCTATT TTCTTCATATGAATGAGACTGGGAATGTGCTCTTCATCGTTCAGTTTTAAGAATGGAACATAGGTTGTGCAACCTATTACAATGTTATTACTTGCTGTCT AAGGAATTTATAGATTAGAAAACGGCTTTTAGGTTTCTGCATTTAGGATTGTGCTGAATATAAAGACGAGTCTAGTAGT
• Tissue: pods
• Gene name: LI_gene_187992;
• Additional information: details;

Expression of Ll_transcript_446562

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.4
• PS3: 0.7
• PW1: 0.2
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446562

• Blastp: B3 domain-containing transcription repressor VAL1 from Arabidopsis with 54.41% of identity
• Blastx: B3 domain-containing transcription repressor VAL1 from Arabidopsis with 54.41% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (AT2G30470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455742.1)
• Pfam: CW-type Zinc Finger (PF07496.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;