| Id Trinity | TRINITY_DN51840_c0_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_446564 |
| Sequence | ATGCATCTCTCTCTCTGTTTCTATTCTGTTCTTGATTGCATGCACTTTCTCTCTTACTCACACAACTCATTCATCTCTAGCTAATTCCTATTTGTTGCTA CCCTCTTCGCTTAAACTGATAGGGAGGGAGACGTTGATTTTATTAATCTTGAATTTGAATTGAATTGAAATGGAATCTGAAGTTTGCATGAATGGTTCGT GCCGCGGTGTCGGGCATGAACGTGAATGGAAGCAGGGTTGGTCTCTGGAATCTGGTGGATTTGCACGTCTTTGCAACAATTGCGGATCTGCTTATGAGAA TTCAATCTTCTGTGAGAAATTCCATCGTGAAGAGACTGGGTGGAGGGAGTGCAGCTATTGCAACAAGTCTATCCACTGTGGATGCATAGTATCATTGTCT TTGTTCAAGCACCTTGATTTTGGAGGTATAGGTTGTGTTACTTGTGTGAAGACTTCCCAACACTGTCTGGATATTGAAAATCCTAATGTGTCTTTGATGT CAACCAAAAGTAATGCAAGTAATCGGCATGCTGCTCATAAGGATGATAGACTGTCAGTGGATAGTGTTGATGAAGGGAGACTTATGCAACTGTGTAGAAT TATTCAAGCTACTGAATCAAGCCAATGCCCTCAAGCTCAGAGAGACGGCACAGTTTCACGTATTGATTCAAACAGCCAAGAAGTTAAGTGTTCATTCAGG GAAGCAGATGCAAGATTTTCGAAAGTGATGAAACCGTCAAGACATACATTAACATCTAACTCATTAGGAAACAGTAGACCAGCATGGGAGAATAAAAATA TGCATGATGCACTTGCACTAAGTATGTCACTGGGAACCCCATCAAAAAACACTGTCCTGCCTTCTGCTACAGAGAAGGCAGAAGAGAGACTCGAGGGCAA AGAATCTCCCCCCTTTCATCAAGGGCAAAGGTCTCACCCTATATTGCCCAAACCATCGAAGACTGGACTAACCATGAATCTGGAAACAAATAATGGAATG ATTTCTGAGGCATGCCTTCCCCGGCCACCTGCCGAGTATAATGGCAAGCATCAGTTACTGCCTCGATACTGGCCCAAGATAACTGATCAAGAGCTGGAGA AATTGTCTAGGAATTTGAAGTCCACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGACGCCGGTCGAATTGGTCGTCTTGTTCTTCCAAAAGC CTGTGCTGAGGCTTATTTTCCTCCTATTTCGAATTCTGAAGGTCTTCCTTTGCGGGTCCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTCAGATTT TGGCCTAATAACAATAGTAGGATGTATGTATTGGAAGGTGTGACCCCTTGCATACAGGCCATGCAATTATGTGCCGGTGATACTGTAACATTTAGTCGAA TAGATCCTGGGGGAAAGCTTGTTATGGGTTTCAGAAAGGCATCAAATTTAATAGATACACAGGATGCTTCTACGTCTGCCAATTGTAATGGCATTTCAAC TAAGGGAACAACCAATTCTGGTGGAACTGAGAATCTGCCACCGGGTAGCAGTTTTGCTGATCTTCTCCAGATGATAAAAGGGAATGGGGAACCTCACTTA AATGGACATCTGGAACATTTTCATTTGGGGGCTGGAGCTGCGGGCTTGCTCAAAGAAGAAAATTGCGAGAAAACAAACAATCATTCACCACAACAACCAA TTCCAGTTTCAGAGAAGAGGACTCGCAATATTGGGCCTAAAAGCAAGAGGTTTTGCATTGATAACGAAGATGCTATGGAGTTGAGACTTACATGGGAAGA AGCACAGGACTTGCTTCGTCCGCCCCCAAGTGTCCAGCCAAGTATTTTCACAATTGAGGACCAAGTAATTGAAGAATATGAGGAACCGCCGGTTTTTGGA AAGAGAACTATATTCTGTGCCTGTTCATCTGGGGGGAAAGAACAATGGGCTCAATGTGATGATTGCTCCAAATGGCGGAGGCTGCCAGTCGATGCTGTTC TTCCTCCCAAGTGGACAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187992; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446564
| Blastp | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 45.67% of identity |
|---|---|
| Blastx | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 45.67% of identity |
| Eggnog | B3 domain-containing protein(ENOG410Z235) |
| Kegg | Link to kegg annotations (AT4G32010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455742.1) |
| Pfam | B3 DNA binding domain (PF02362.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |