Ll_transcript_446543

• Id Trinity: TRINITY_DN51840_c0_g1_i8
• Name Transcript: Ll_transcript_446543
• Sequence: CATGCATTTTATGCACTTCAATTTTTGCATGCACTCTCTCTCTCCTCTTTCTCTCTATCTATCTTTCTATTCTGTCTTTCTCTCTCTACAAAAAAAAAAA AAACCACACACACCTCTTTTTCCTTCAATCCCATTCACACGTTCACACTTTCTCTCTCTAAAATCAAGTTGAATTTTGAATTGATGGGTTCAGACATTTA CGTGAATGCTTTGTGTGTGCACGATTGGAAGAAGGGTTGGCCTCTGCGATCTGGTGGATTTGCCCAACTATGCACCAAGTGCGGATTCATGGAGGAATGG AAGCATGGCATCCTTGATCCATTATCGGCTTATGAGATGTCAGTTTTTTGTAATAAATTCCATCCTAAAAAAACTGGATGGGTGGAGTGTAAATTTTGCA ACAAGCTTATCCACTGTGGATGCGTAGTATCTCGATCTTTGTTCGAGTACCTTGATTTCGATGGCGTAGGTTGTGTTAGCTGTGTAGCTTCCCAACTTCA TATGATGAGGAATACTGAAAATCCTAACGGGTCTATTTCATCGGCCAAAAATAATGCAAGTGATCGGCACCCTTCTTATATTGATGGCACACTGTTTGCG GATAGTGTTGATGAAGGAAAACTTATGCAATTGTGCAGAATTGTTGAAGCTAGTGAATCCAGCCATTGGAATAATGCTCCGAGAAATAGCACAATATCAC GTAGTGGACAAAACAGCCAAGAAGTAAAGTGTTCATTGGGGGAGGTGGATACTAGACTTCCAAATATGATTCAACCATCGGTTCATTCACTAACATTTTC TAAGTTAGAAAATAATAGATCAACATGGGAGATTAAAAACGTACATGAATCAACTGCACAGTCATCTTTGAATATGCATATGGGAAGTCCATCAGGGAAC AAAAATGTCCTGCCTTCTTCTGGAGAGTTCGTAGAAGCACGACCTGACGGGAAAGCATTTCCCCTCTTTCATCAAGGACAAAGAGTTCGCTCTATATTGC GCAAGCCATCGAAGATTGGGCTATCCATGGATCTGGAAACAGATAAAGGAACATTTTCTCATGCACGAATTGCCCGACCACCTTCTGAGGGGAGGGGCAA GAGTCAGTTGCTTCCCCGATATTGGCCCAGGATCACTGATCAAGAGCTGGAGCAGTTGTCCGGAGATTTGAAGTCCACTGTAGTGCCTTTATTTGAGAAG GTATTGAGTGCAAGTGATGCCGGTCGAATTGGTCGTCTTGTTCTTCCAAAAGCCTGTGCTGAGGCTTATTTTCCTCCTATTTCGAATGCTGATGGCCTTC CTTTGCCGGTCCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTCCGATTTTGGCCTAATAACAACAGTAGGATGTATGTGTTGGAGGGTGTGACCCC TTGCATACAGGCCATGCAATTATGTGCCGGTGATACTGTAACATTTAATCGGATAGATCCCGGGGGAAAACTTGTTGTGGGTTTCAGAAAGGCATCGAAT TCTATAGATACACAGGATGCTTCTCCATCTTCCCTTTCCAATGGCATTTCAATGAAGGGAACAACCAATTCTGGTGGAACCGAGAATCTTCCGTTGGATA GCAGTTATGCTGATCTTCTTCAGTCGATAAAAGGGAATGGGGAATCCCACATAAATGGACATCCGGAACATCTTCATTTTGGTGCCGGAGCTGTTGGTTT TCTTACAACAGAAAATTGTGAGAAAACAAACAAACAATCACCGCAGCAACCAATTCCATTTTCAGAGAAGAAGAGGACTCACAATATTGGGCCTAAAAGC AAGAGGTTGCGTATTGATAACGAAGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCACAGCATTTGCTTCGTCCGCCGCCAAGTGTCCAACCAAGCA TTGTCACAATTGAGGACCAAGTAATCGAAGAATATGAGGAACCACCGGTTTTTGGAAAGAGAACTATATTCTGTGCTTGCTCATCTGGGGGAAAAGAACA GTGGGCTCAATGTGATGATTGCTCTAAATGGCGAAGGCTGCCAGTCGATGCTCTTCTTCCTCCGAAGTGGACATGTTTCGAAAATGGTTGGGATGGAAGC AGGTCTTCATGTTCCGTGCCGGAGGAGATGAGTTCAAGGGAATTAGAAAATCTTCTGAAACCCAGCAAAGATTTTAAGAGGCGAAGAACTCTAGAAAACG GTAAGTCGATAAAAGAGCATGAGCCTTCTGGATTAGATGCCCTTGCCATTGCAGCAGTTTTAGGAGAAAACCTTACCGACCCGGCCGAGTCATCAGCCGG AGCCACCACAAAACATCCTAGACACCGTCCCGGTTGCTCTTGTATTGTATGCATCCAGCCTCCTAGTGGAAAGGGGAGACATAAGCCAACCTGTACTTGC AACGTGTGCATGACCGTGAAGCGACGATTCAAAACCCTCATGCTACGAAAGAAGAAACGCCAATCAGAACGCGAAGCAGATGCTGCTAAAGAAGACAATA ATCACCCGAGAGACGAGTCAGAAGCCGATGGAGCATCAAAATCAAAAGATGATACTAGCCATCTCGAGAACGAGGGAGGCCGAGGTCAACCTGAGGCGGG CGAGTCCAGTGCTGGACAAATAGACTTAAATTCGCATCCGAGTCGCGACGATACGCAAATGGATATTACAGGACTTAGCATGTCTATTAATCATCTTGAA ATTACAAACCATCAAGCAAAGGAATATATGACTCAGAATGGCCTAAAAAGCTTCAATAGTGAAGTGCATGCTGATCAACATTCTTTATTACTCACTCAAT CTAATGGACAAGGTCAAAACAATCTTTCTTGACAATTTATTTTTATATCTCTCTCAAAGTAAATCTATTTTTGTTTTCTTTTTCAAAGGGATGGTCAAAT ATAGTTCTTTCTTACAATCAAGAGATTGTAATTTTGTTCTCCATCTTTTGAATTATTTTACTTTATGGAAATAGTTCTTGCAAATTTCTTTACTTGATAA TGTATTTGCTTTTCTTTTATGAGAATGAAAGATTGGAACAAAGTATAGTGTCTATAAATCATTTTGTTTATATTATGTCTGGTTTTGCCATTAGTGAAGA TTCTATG
• Tissue: pods
• Gene name: LI_gene_187992;
• Additional information: details;

Expression of Ll_transcript_446543

FPKM

• PAB: 1.2
• PNAB: 0
• PS1: 0.3
• PS2: 1.4
• PS3: 0
• PW1: 0
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446543

• Blastp: B3 domain-containing protein Os07g0679700 from Oryza sativa with 46.08% of identity
• Blastx: B3 domain-containing protein Os07g0679700 from Oryza sativa with 46.08% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (4344293)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430569.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;