Id Trinity | TRINITY_DN51840_c0_g1_i9 |
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Name Transcript | Ll_transcript_446544 |
Sequence | TTGAATTTTGAATTGATGGGTTCAGACATTTACGTGAATGCTTTGTGTGTGCACGATTGGAAGAAAGGGTGGCCTCTGCGATCTGGTGGATTTGCTCAAC TTTGCATCAATTGCGGAGTCATGGAGGAATGGAAGCGCGGGATTCTCGATCCGTTATCTGCTTATGAAATGTCAGTTTTCTGTAATAACTTTCATCGTCA AAAAATGGGATGGATGGAGTGTAAATTTTGCAACAAGCCTATCCACTGTGGATGCATAGTATCTAGATCTTTGTTCGAGTACCTTGACTTTGACGGCATA GGTTGTGTTAGCTGTGTAGCGTCCCAACTTCGTATGATGAGGAATACTGAAAATCCTAACGGGTCTATTTCATCAACCAAAAATAATGCAAGTGATCAGC ATTCTGCTCTTATTGATGGCACACTGTCTGTGGATAGTGTTGGTGAAGGAAAACTTATGCAATTGTGCAGAATTGTTGAAGCTAGTGAGCCCAGCCGTTG GAATAATTCTCGGAGAGATAGCATAATATCGTGTAGTGGACAAAACAACCATGAAGTGAAGCGTTCATTTAGGGAAGCGGATACTAGATTTTCGAATGTG TTTAAACCACCGGTTCAGTCACTAGTGTTTTCTAAATTTGAAAATAGTAGATCAACATGGGAGATTAAGAACACACATGAATCAACTGCACAGCCATCTT TGAATATGTATCTGGGAAATCCATCGGGGAACAACACTATCCCGCCTCCTTCTTCTGGAGAGATCGTAGATGCAAGACCTGAGGGCAAAGCATCTCCTCC CTTTCATCAAGGGCAGAGATCTCGCCCTATATTGCCCAAACCATTGAAGATTGGGATGTCCATGAACCCGGAAACAGATAAAGGAACAATATCTCATGCA CGAATTGCTCGGCCACCTGCTGATGGGAGGGGCAAAAGTCAGTTACTTCCTCGATATTGGCCTAGGATCACTGATCAAGAGTTGAAACGATTGTCTGGAG AGTATCCTTTTGAGTTTTTTTCATTTTAGTGTTCTTGCACATCTATAGTAAACTGTGACGATATAAAGTTGATTTATCAAGTTTCCCTTAATGTTATGAT AACAGTTTGAAGTCCAACGTAGTGCCTTTATTTGAGAAGATATTGAGTGCCAGTGATGCAGGTCGAATTGGTCGACTTGTTCTCCCGAAAGCCTGTGCTG AGGCTTATTTTCCTCCGATTTCGAATTCTGATGGTCTTCCTTTGCGGGTTCAAGACGTGAAAGGGAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAA TAACAATAGTAGGATGTATGTATTGGAAGGTGTGACCCCTTGCATACAGGCCATGCAATTATGTGCCGGTGATACTGTAACATTTAGTCGAATAGATCCT GGGGGAAAGCTTGTTATGGGTTTCAGAAAGGCATCAAATTTAATAGATACACAGGATGCTTCTACGTCTGCCAATTGTAATGGCATTTCAACTAAGGGAA CAACCAATTCTGGTGGAACTGAGAATCTGCCACCGGGTAGCAGTTTTGCTGATCTTCTCCAGATGATAAAAGGGAATGGGGAACCTCACTTAAATGGACA TCTGGAACATTTTCATTTGGGGGCTGGAGCTGCGGGCTTGCTCAAAGAAGAAAATTGCGAGAAAACAAACAATCATTCACCACAACAACCAATTCCAGTT TCAGAGAAGAGGACTCGCAATATTGGGCCTAAAAGCAAGAGGTTTTGCATTGATAACGAAGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCACAGG ACTTGCTTCGTCCGCCCCCAAGTGTCCAGCCAAGTATTTTCACAATTGAGGACCAAGTAATTGAAGAATATGAGGAACCGCCGGTTTTTGGAAAGAGAAC TATATTCTGTGCCTGTTCATCTGGGGGGAAAGAACAATGGGCTCAATGTGATGATTGCTCCAAATGGCGGAGGCTGCCAGTCGATGCTGTTCTTCCTCCC AAGTGGACAT BLAST |
Tissue | pods |
Gene name | LI_gene_187992; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446544
Blastp | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 50.43% of identity |
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Blastx | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 56.68% of identity |
Eggnog | B3 domain-containing protein(ENOG410Z235) |
Kegg | Link to kegg annotations (AT4G32010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439590.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |