| Id Trinity | TRINITY_DN51844_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_445975 |
| Sequence | GAAGATGATAAAGCTTTATGCAGGTATATGGTACAACTTGCAAGAAGTCAATTTCATTGCACAGAGAGAACACCAACGCAGGTTATAAGTGTCATGTCAA GCTGTGGGCATTGTTTAACTTGTTCTCTGCCATCCCATACTCAAATGACAGTTCAACAAATTTATATCTGCAGCTATAAGCCTATATAGTAATATTATTA TGACACCAACGCAGTTTAAAATGTATACACTGACAATGTAAAGATTTATACACATGCACCTCATCATCCACCGTCTATTTGAATTACTTTTTTTGAAAAG TCAACAACAATTAAATATTAACGGTGAATGATGTAACGACAGTGTATAAAACTTATAACCGTCAGTGCATACATCTTTTTACTCATAATCTAAACCATTA ATTACTTCTATAGTGGTGCATCCTTATTACAATTTCACTGCTCAAATAATCTAAAATTTCAGTTACAATTTAAGTGCTTATAAGCTAAAATTTCAGTTAC AATTTTCACTGCTTATAAGCTAATTTGCATACTATATAAACCTGATCTGAATTCTTCATTCACTGTTAACAACGCAATGTCTCTGTTTCACTCGGTTTCT TCCACTTCTTCTTTCACTTCTCTTCGTTCCGTTCCAATTCACTCTTTTCCTCGCACTTCACTCCAAAACGGCGTCGTTAGGTGTAAGGTTATAGAGCCAT TGAAGTTCCAGAATGGGAAACCAAGTGAAAGTGAGTTACTATTGAACGGTGGTGGAGGTTCAATTCCGAGTTTCTTAGTGACACCTAATGCTCGTGTCAA GGATTTGGTTAACGGAAATGATACTCGTCTTCGTATCTTTTCCGGCACTGCTAATCCGTCTCTTGCTCAGGAAATTGCATGCTACATGGGCCTGGAGCTA GGAAAAATAAAAATAAAGCGTTTTGCAGATGGTGAGATATATGTTCAGTTGCAAGAGAGTGTCAGAGGGTGTGATGTGTTCCTTGTGCAGCCCACTTGCC CCCCTGCCAATGAGAATCTTATGGAGCTCCTTGTAATGATTGATGCGTGCAGAAGAGCTTCGGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATA TGCTAGAGCTGACAGAAAGACTCAAGGGCGTGAGTCCATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGT GACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTTTACGGACAGCCTGTTATACTTGATTACCTTGCCAGCAAGACCATTT CTTCAGATGATTTGGTAGTTGTCTCACCGGATGTTGGTGGTGTTGCTAGAGCACGTTCGTTCGCCAAAAAATTATCTGATGCTCCTTTAGCGATTGTTGA TAAAAGACGTCAGGGGCATAATGTTGCTGAGGTGATGAATTTGATAGGAGATGTAAAGGGAAAGGTAGCAGTTATGGTGGATGACATGATTGATACTGCT GGAACTATTGCCAAAGGTGCAGCTCTATTGCATCAAGAAGGGGCTAGAGAAGTCTATGCATGCAGTACACATGCTGTTTTTAGTCCTCCTGCTATAGAGA GGTTATCGAGCGGCTTGTTTCAAGAAGTTATCATAACCAACACAATTCCTGTGGCAGAACAGAACTATTTCCCCCAACTAACTGTTCTATCAGTCGCAAA CCTTCTCGGAGAGACTGTATGGCGTGTTCATGATGATTGCTCAGTGAGTAGCATATTTCAGTAAAATATGTTTATTCTTTCATTTTACCAATACAAAATT TAAAAATTGTTGAGAATTCGTGACTACCCTTAATACTTATTCTGTTACTCACATGCATGCTTGCTTACATATACATATCCATTTGTTGTAAAATTAATGG AAAATGATTATGATGCAGCAATTGGTTTTCCTGTTCATCAATATATTGTGTTTATAATTGCAAATCTGGTAGTCAAATTTGACTTCTATCTAGTAGTATG TTAGCTTTTTTCTTTATTTTCTTTTATAATTAATTTTCAATTAAGCATGAGTTTTTGTTAGTTTTCTGTGTGGGATTTAGTGGTGTCAATTGTAGATTTA TCTTGCAACTTTTTTCTTCTTTTTTCTTTCCCTTTTATCTTCTTTGTCAGGGTGGAATTGAACCTTTTTCCAGTTTGGGAATTGATTGAACAATTTCTTT CAATGGTATGCACGTTCAAGCTTATGACCCTTCACTAACAAGGGCAAGAATGTAAAGTGAATTCACCAGGAGAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_188017; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445975
| Blastp | Ribose-phosphate pyrophosphokinase 1 from Spinacia with 92.81% of identity |
|---|---|
| Blastx | Ribose-phosphate pyrophosphokinase 1 from Spinacia with 93.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463471.1) |
| Pfam | N-terminal domain of ribose phosphate pyrophosphokinase (PF13793.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |