Ll_transcript_445978

• Id Trinity: TRINITY_DN51844_c1_g2_i4
• Name Transcript: Ll_transcript_445978
• Sequence: TTTTGTTTAGTTTTAGAAATATTTTTATAGAAAATAATAAAACAAAAATTTGGCGGAATTTAGAATGCTTCAGATATGTTATTATGTACTTTATCTCTAT CCTTGTATGAGTAGATACTTTATTCCCTTAGTAGTATTATGAGTATAAAATGACAGCTTAAAGATTTATACACATGCACCTCATCATCCACCGTCTATTT GAATTACTTTTTTTGAAAAGTCAACAACAATTAAATATTAACGGTGAATGATGTAACGACAGTGTATAAAACTTATAACCGTCAGTGCATACATCTTTTT ACTCATAATCTAAACCATTAATTACTTCTATAGTGGTGCATCCTTATTACAATTTCACTGCTCAAATAATCTAAAATTTCAGTTACAATTTAAGTGCTTA TAAGCTAAAATTTCAGTTACAATTTTCACTGCTTATAAGCTAATTTGCATACTATATAAACCTGATCTGAATTCTTCATTCACTGTTAACAACGCAATGT CTCTGTTTCACTCGGTTTCTTCCACTTCTTCTTTCACTTCTCTTCGTTCCGTTCCAATTCACTCTTTTCCTCGCACTTCACTCCAAAACGGCGTCGTTAG GTGTAAGGTTATAGAGCCATTGAAGTTCCAGAATGGGAAACCAAGTGAAAGTGAGTTACTATTGAACGGTGGTGGAGGTTCAATTCCGAGTTTCTTAGTG ACACCTAATGCTCGTGTCAAGGATTTGGTTAACGGAAATGATACTCGTCTTCGTATCTTTTCCGGCACTGCTAATCCGTCTCTTGCTCAGGAAATTGCAT GCTACATGGGCCTGGAGCTAGGAAAAATAAAAATAAAGCGTTTTGCAGATGGTGAGATATATGTTCAGTTGCAAGAGAGTGTCAGAGGGTGTGATGTGTT CCTTGTGCAGCCCACTTGCCCCCCTGCCAATGAGAATCTTATGGAGCTCCTTGTAATGATTGATGCGTGCAGAAGAGCTTCGGCCAAAAATATTACTGCT GTCATTCCATATTTTGGATATGCTAGAGCTGACAGAAAGACTCAAGGGCGTGAGTCCATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTG CAAATCGTGTTCTTGCATGTGACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTTTACGGACAGCCTGTTATACTTGATTA CCTTGCCAGCAAGACCATTTCTTCAGATGATTTGGTAGTTGTCTCACCGGATGTTGGTGGTGTTGCTAGAGCACGTTCGTTCGCCAAAAAATTATCTGAT GCTCCTTTAGCGATTGTTGATAAAAGACGTCAGGGGCATAATGTTGCTGAGGTGATGAATTTGATAGGAGATGTAAAGGGAAAGGTAGCAGTTATGGTGG ATGACATGATTGATACTGCTGGAACTATTGCCAAAGGTGCAGCTCTATTGCATCAAGAAGGGGCTAGAGAAGTCTATGCATGCAGTACACATGCTGTTTT TAGTCCTCCTGCTATAGAGAGGTTATCGAGCGGCTTGTTTCAAGAAGTTATCATAACCAACACAATTCCTGTGGCAGAACAGAACTATTTCCCCCAACTA ACTGTTCTATCAGTCGCAAACCTTCTCGGAGAGACTGTATGGCGTGTTCATGATGATTGCTCAGGTGGAATTGAACCTTTTTCCAGTTTGGGAATTGATT GAACAATTTCTTTCAATGGTATGCACGTTCAAGCTTATGACCCTTCACTAACAAGGGCAAGAATGTAAAGTGAATTCACCAGGAGAAAAA
• Tissue: pods
• Gene name: LI_gene_188017;
• Additional information: details;

Expression of Ll_transcript_445978

FPKM

• PAB: 7
• PNAB: 27.6
• PS1: 24.4
• PS2: 20.1
• PS3: 23.7
• PW1: 38.3
• PW2: 33.7
• PW3: 22.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445978

• Blastp: Ribose-phosphate pyrophosphokinase 5, chloroplastic from Arabidopsis with 84.55% of identity
• Blastx: Ribose-phosphate pyrophosphokinase 5, chloroplastic from Arabidopsis with 83.7% of identity
• Eggnog: Phosphoribosyl pyrophosphate synthase(COG0462)
• Kegg: Link to kegg annotations (AT2G44530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463471.1)
• Pfam: N-terminal domain of ribose phosphate pyrophosphokinase (PF13793.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;