Id Trinity | TRINITY_DN51844_c1_g2_i5 |
---|---|
Name Transcript | Ll_transcript_445984 |
Sequence | AACGGGTGTCTGGCGGAGGTGGCGAAACGCTTAAACCCTCTCCCCAAACTCTGAATTGTGATCGTAAAAAGATACAAAACCCTAAACCCTCTTTTTCTCT TTTTGTGACAAATAATCATAACAAGTGAGCACATAATTAAACATCCATACATAGATGAATGTTGAATTTGATGATGAAATTTCAGAGTATCACATGTAAT CACGACACAGTGAGCAAAAAGCTTCTGTTTTTCATTGCACCCACAGCACGAGTCCTCTCTTTCCGCTCTTCCCATGCTAAAACTTTGTCCATCGAGGTAA GCAATTCTGCTGGTCCTTTAAATGCCCAGAGGCGTCGGTGGTCCTATGCTGCTTCAGCTTCTGCCCCTTCTGAAAATGACACACTAAATGAACCGAAAGG CCGAAAGAGGATTTCAAAACAAGAACGGAGAGCTATCGTGGAGGCTTTTGTCAACAGGTACAGAGAAATGAATGCTGGTAAGTTCCCAACAGCATCTGTT GCCCAGAACCAAGTAGGTGGCGGTTTTTATTTTCTCCGGGAAATCATTCAGGATCTAGAATACAAGAGTAAAATGAATTCTTCAAACATCAAGGATGAGA ACTTGGTAAAAAAGGAACCATTTAATCAGAGTAAACTTCTAACCACTGAAACTGTGAAGATCTTATCTGTAAATACCGAGACTGCAATAGATAGGCCTAG CCGAGATGATTTTCAGTCGGTAGTTTCAGATGTCAGAGAAACTGTTAACACTGGTTATGATCATCTTGAAGAAAAGAGAGGGTCACAGACTTCATCTTGC AAGGATAGAGGGTTGTCTAAAGAAATTGAAATTATCTCTACACCAGATAATCATTGTGTTGCGTCTGATATTAATCATCCGGGAAAGTGTTCTGAGGAGC CTGACCCGTCAAGTCTCGGCATATTGAATGATGTTAAGACTGAGGAAGCTTTCTCTAGACATTCTGATTCTGTTGCACCAGAAAGTCACCTGCTACATGA GGAAAAAGAACATGTTTCTACTCCATTTAGTGAAACCTATGGTACTGATTATGGTCAAGCTCAGGGTCATGATACTGAATTTAATGATGCAGGAAGTTCT CAAATAATTGACGAAAAAAACATTGAGAAGTCAGGTTATGAGAGAATGGAGCAAGCTGCCTTGGAAGGCCTGTCTGAAGAGCCCTCCCTTTCAAGTCTCC AGGTGCCAAATGATGTGAAGGCTGGGGAAGATTTGTCTAGTCATTGTTCTGATTCTGTTGCATCAGAAAGGCACCAGCTAAAAGAAGAAACAGACCATGA TTCTGCTTCATTTATTGAAAAATCTTGCAGCGGTCACAGTGAAACTCAGAGCCCTGTTTCTAAGTTTGTTGATACTGAAAACCATCCAATGACTGAGGTA AAAAACTTTAACAAAGGACATGAGGGAAAAAAGCAAGATGGCTCAGGAGACCTTCCTGGTATGGATAGTCCAAAGCATAAAATTGAGCAACCTCTAGGGT CTTCAGAATTGGATGAGTCCAAAATTGACAACTCTAATAATAGGGAGATAAGTGTTGCTGTGGTTCCAGCAAAATCAACTTTATGGGGAAATCTGAAGTC ACTTGCAGATGGTATAATAAATTTCTGGAGAAGATGATAAAGCTTTATGCAGAGAGAACACCAACGCAGGTTATAAGTGTCATGTCAAGCTGTGGGCATT GTTTAACTTGTTCTCTGCCATCCCATACTCAAATGACAGTTCAACAAATTTATATCTGCAGCTATAAGCCTATATAGTAATATTATTATGACACCAACGC AGTTTAAAATGTATACACTGACAATGTAAAGATTTATACACATGCACCTCATCATCCACCGTCTATTTGAATTACTTTTTTTGAAAAGTCAACAACAATT AAATATTAACGGTGAATGATGTAACGACAGTGTATAAAACTTATAACCGTCAGTGCATACATCTTTTTACTCATAATCTAAACCATTAATTACTTCTATA GTGGTGCATCCTTATTACAATTTCACTGCTCAAATAATCTAAAATTTCAGTTACAATTTAAGTGCTTATAAGCTAAAATTTCAGTTACAATTTTCACTGC TTATAAGCTAATTTGCATACTATATAAACCTGATCTGAATTCTTCATTCACTGTTAACAACGCAATGTCTCTGTTTCACTCGGTTTCTTCCACTTCTTCT TTCACTTCTCTTCGTTCCGTTCCAATTCACTCTTTTCCTCGCACTTCACTCCAAAACGGCGTCGTTAGGTGTAAGGTTATAGAGCCATTGAAGTTCCAGA ATGGGAAACCAAGTGAAAGTGAGTTACTATTGAACGGTGGTGGAGGTTCAATTCCGAGTTTCTTAGTGACACCTAATGCTCGTGTCAAGGATTTGGTTAA CGGAAATGATACTCGTCTTCGTATCTTTTCCGGCACTGCTAATCCGTCTCTTGCTCAGGAAATTGCATGCTACATGGGCCTGGAGCTAGGAAAAATAAAA ATAAAGCGTTTTGCAGATGGTGAGATATATGTTCAGTTGCAAGAGAGTGTCAGAGGGTGTGATGTGTTCCTTGTGCAGCCCACTTGCCCCCCTGCCAATG AGAATCTTATGGAGCTCCTTGTAATGATTGATGCGTGCAGAAGAGCTTCGGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCTAGAGCTGA CAGAAAGACTCAAGGGCGTGAGTCCATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGACCTCCATTCT GGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTTTACGGACAGCCTGTTATACTTGATTACCTTGCCAGCAAGACCATTTCTTCAGATGATT TGGTAGTTGTCTCACCGGATGTTGGTGGTGTTGCTAGAGCACGTTCGTTCGCCAAAAAATTATCTGATGCTCCTTTAGCGATTGTTGATAAAAGACGTCA GGGGCATAATGTTGCTGAGGTGATGAATTTGATAGGAGATGTAAAGGGAAAGGTAGCAGTTATGGTGGATGACATGATTGATACTGCTGGAACTATTGCC AAAGGTGCAGCTCTATTGCATCAAGAAGGGGCTAGAGAAGTCTATGCATGCAGTACACATGCTGTTTTTAGTCCTCCTGCTATAGAGAGGTTATCGAGCG GCTTGTTTCAAGAAGTTATCATAACCAACACAATTCCTGTGGCAGAACAGAACTATTTCCCCCAACTAACTGTTCTATCAGTCGCAAACCTTCTCGGAGA GACTGTATGGCGTGTTCATGATGATTGCTCAGGTGGAATTGAACCTTTTTCCAGTTTGGGAATTGATTGAACAATTTCTTTCAATGGTATGCACGTTCAA GCTTATGACCCTTCACTAACAAGGGCAAGAATGTAAAGTGAATTCACCAGGAGAAAAAAAAAGTGGATTTATAGAAAAAGCTGTTATTGTAGAGGGAACT ATTTGTGGAGTGTTTTGTACTTGTATTGTAAAATCCACAATTGAAATGGTGGAGGAAATCTTGTTTCTTTTCCTTGTAGTACATACTTTTGAAGATGATA TGGTGAATTTGATTGCTGAGTTGTGTGGCTATTATTCTCAGTCATTTAACTACTTCTATTAGTCTTTTATGCATTCACATAAAACATTTTAC BLAST |
Tissue | pods |
Gene name | LI_gene_188017; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445984
Blastp | - |
---|---|
Blastx | Ribose-phosphate pyrophosphokinase 5, chloroplastic from Arabidopsis with 83.7% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457129.1) |
Pfam | - |
Rfam | - |
GO | - |