| Id Trinity | TRINITY_DN51845_c0_g4_i7 |
|---|---|
| Name Transcript | Ll_transcript_445956 |
| Sequence | AGTATATACACTTAAAGTTACCCCTCCTTAAAACCTAATTTATTCATCTTCCGCAGCACTATCACTATTTCTTCACTCCTTCCCATATTCACTCACGTCA AAGAAAAACCGTTTCTAGACTTCAGTTCAGTCTGTGGGCTATTGAGAAAATGGACTTGAAACAAAGTGAAAAAGATCCTGTGATTACTCAAATTAGCATT GGTGGATTTGGCAGTGAGGTCAAAGCAAAGGATCTTGTAACATACTTGGAAGATAAAATTGGACTTGTATACAGGTGTCGGTTGAAAACTTCTTGGACAC CTCCCGAGTCTTATCCAGAATTTAATATCATTAATGCTGCACATATTACAATAACAGATGACTATCAGAAGGTTGAGCCCCATGCCTTTGTGCATTTTGT ATTGCCGGGATCTGCAAAGGCAGCCTATGATGTTGCAGGTCGTTGTGATCTATCTTTGAGGAATCAACAATTAATGGTCAGCTGTGGCCCTGAAAATCCA TACTTCTTGAACCAAAGGAGGAGTACTACAACTCCTTTCAAGCTGTCTGATGTAATTTTCGAAATTGGGACCTTAGTGAGCCCGGAGGAATATATTGTTG CTTGGAGAGGAACTGATAGAGGGGTCAACTTTCTGGTGGATCCTTTTGATGACATGTGCAGACTTTGTTTCAACAGAGATACTGCATTCTCATTCAAAGG AGATGTGAGAAAGGCAGTGATAAAGTGTGATTTTCAGGTGGGATTCTTAATAAGAGACATAAACGAGATCAGGCGATATAATGATACATCTCATTACATT ATTTTATTACATCTGGCTTCACCACCTTTGGTTTGGTACAGGACTGCTGATGATGATATAGTAGATTCAGTTCCATTTGATTTGCTAGATGATGATGATC CTTGGATTAGGACTACTGATTTTACAACTAGTGGGGCCATCGGACGATGCAATTTTTATAAAATTTCAGTCCCACCTCGTCATGGTGCAAAACTGGAGAA GGCCATGAAATACCTGACAGGTCGAAGAGTGCAACAGATTCAACTTAGAAGGCCACTTAGGATACGGAACGAACCTGATTTTGGAGAGCTTATGTCAGAT CCCTTCTTCTGTATTCACTTTCAGGAGGGCATTACTTTTGACATAATGTTCTTGGTCAATGCAGTCATACACAAAGGGATATTAAACCAGCACAGGGTAT CAGATAGTTTTTTTGAATTACTGAGAAATCAACTTAAGGATGTTAATGTGGCTGCCCTGAAGCACTTATGGTCTTATAAGCGCCCAGTTTTTGATGCAGT TAAGAGGCTTAAAGCAGTCCAAGAATGGCTGCTTAGAAATCCGAAACTTTATGAGAGCTCTAACCTGTTAGATCATATTGTTGAGGTTAGAAGACTGGCA ATTACTCCAACAAAAGGATATTGTTTACCACCAGATATTGAAGTGTCCAACAGGGTTCTCAGAAAATTCAAGGATGTTTCAGATCGTTTCTTGAGAGTCA CCTTTATGGATGAAGGTATGCAAACAATGAATGTGAATGCGCTTAACTACTATGTTGCTCCTATAGTAAAGCAAATCACATCCAACTCCTTTCCACAGAA AACTAAGATATATAAAAGGGTGAAAACCATTTTGGAGGACGGATTTTACTTGTGCGGCCGAAAATATTCATTTTTGGCCTTTTCATCCAATCAGCTGAGG GATCGTTCTGCATGGTTTTTTGCTGAAGACAACAACCTATCTTGTGATAATATTAGAAGTTGGATGGGTAGGTTTAATCAAACGAATGTAGCTAAGTGTG CTGCTAGGATGGGACAATGCTTCTCGTCGACATATGCAACTGCAGAAGTTGCAGCAAATGAAGTCAACTCCATGCTGCCTGATATTAAGAGGAATAATTA TGTTTTCTCTGATGGCATTGGCATCATCTCTCCTGATCTTGCAAGTGAAGTTGCAGAAAAATTGAAATTGGATAACATACCCTCTGCTTATCAGATCAGA TATGCTGGTTTTAAAGGGGTTGTAGCTTCTTGGCCTATCACAGGGGAAAAGTTCCGACTTGCTTTAAGGCCTAGTATGGACAAATTTATATCTTCTCATA CTAACCTGGAGATTTGTGCTTGGACCAGATTTCAGCCCGGTTTTCTCAATAGGCAGATTATAACATTGCTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188027; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445956
| Blastp | RNA-dependent RNA polymerase 6 from Arabidopsis with 63.31% of identity |
|---|---|
| Blastx | RNA-dependent RNA polymerase 6 from Arabidopsis with 63.83% of identity |
| Eggnog | rna polymerase(ENOG410XQMQ) |
| Kegg | Link to kegg annotations (AT3G49500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437723.1) |
| Pfam | RNA dependent RNA polymerase (PF05183.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |