Ll_transcript_446507

• Id Trinity: TRINITY_DN51849_c1_g1_i2
• Name Transcript: Ll_transcript_446507
• Sequence: CAACAACATGGATTCACAAGTCTTCACTTATTACAATCTATCACCTTTCTTCTTCTCCTTTCACTTCTTTCTCTAAATTTCCACAACACCAATTCTTCTA TTTCTCTTTTTCTCTTTTACCCAATCTCTCACTTTTAACTTTTTCTTTCTCTTTTAATTTTCTACTAACTTGGGACCATTAAAGTTCTACCTTTTTTCAT TCTAAGTTATTATGCTCTTCTGGGCAACTCTATAAGGTCCCTTTTTTAGTTTTCTTAATTTCAATAGTTTTTTTCATTCTATGTGTCTTTCTTAGCTCAT GCTTGTTTCTAAAGTTGATTATAAGTTGGTGATGCTGCAGAAGCAAAAGGGTTTTTGTATGTTGTTGAATTTCAATTGTTTGTTCAATATTGATGATTTT TTTTTTGTTTTTGTTTGCCTGTCATGTGTTTGATCTTGAAACTGTGAGGTGTTTTGAATTTTCTTGCTCCAACTTCCAACCATTGGGTAAAGTTTGAAAT TTTGAAGTTGTTTTCTCAATCTCATAGGTTGTCTACATTGTTTGGTGTCCTTTTTTGAAAGTGGTACTTTTTTCCATTGTGTTTTTCTGCCTGATATACT CTGACACATAATTCATGTGCATGTCTATTACCAATGTTGTGAAATTTGTTGCATAGTGTGTCTTTTTTTTTCTAGCTTTTCTGAAATATGTTGCATGTCT TTTGTTTGCTTTTCCATATCACATGATCTTCATCTTTTGGGTTCTCTGGATCTTGCAATTCTAGATATGATCTCTTTCATCAGCTTTGTAGTTTTGAATT TATTAGTGAATCGACCCGTTTTTTTGCTAAAGTTTTTCGGTATTTAGTAACTGAGTTTTTTCAATTCCATTTTGTTAACTTTTCAATGTGGCCTATACAA TTGGAGTTCTATATTCCTGGTTTAGTTTTTTCCTCTTTTTTTGTTTTTGCTTCAAGGTCAAACCCTTTACTCTTTTTACGTGTTCTTCGGGGCCATATAT TATTTTTGCTCTACTGATTTTTCATTTTGAACTTATTCAGTGTAGTAATCATTCCAAAGCAGGAAAAGAACTTATTTGGTCTGGTTGTACTGCAGTATAT CACTCAAGAGTAAAGTTCCTTCCAGAGAGTGGAGCTTGGTGTGATCACTGATCTTGGGGAATAATATCTTATTGATATTTCAAATGCTAAATTTCGGTAG GTCCAGAACTCAGCCCAGGGCAACCAGGTCTATGTCAATGGGAGGGATGGATTATGCTGATCCAAAAAGGAAGGGCAACTTTTTTGTAAAAGTTTTTCTT GCTGCAGCGTTGACGACATTATGCATCTTCTTGATCAAAAGATCTCCATCTTTTAATTCTCCGAGTCCCTTTTCCATCCATGAGCCAGGGGTCACTCATG TTTTAGTAACAGGAGGTGCAGGCTATATTGGCTCACATGCTACCCTACGACTTTTGAAGGACTCTTATCGTGTCACCATAGTGGATAATTTGTCTCGAGG AAATTTGGGTGCCGTTAAGGTTCTTCAGAACTTATTTTCAGAACCCGGAAGACTTCAATTTATATATGCTGATTTGGGAGATGCAAAATCTGTATCCTAA TAATCTTTCCTTGTTGCAAAAATATTTACTTTTAAATTTTAACTTCGATTGAAACGAATGCTAAAGAATGACCAAAAATTTGTCTACTTGACTAGTTATA AGGTTGATAAAATATTTTCAGAGAATAAATTTGATGCTGTGATGCACTTTGCTGCTGTTGCTTATGTGGGAGAAAGCACACTTGACCCTCTTAAGTATTA TCACAATATTACATCAAATACATTGTTGGTATTGGAGTCTATGGCTAAACATGGTGTGAAGACATTCATATATTCTAGTACATGTGCAACATATGGGGAG CCTGAAAAGATGCCTATTACAGAAATAACAGAACAGGTGAAAAATCTGAAGTGCTTGAATTTGTGGTTTGGCCAAGAGCTATTTTTCGGCATTTCATCCT GCAATGGCTTTAATCATGTGAGAATGTAGTGCTAAAGTTGATGATCTTCAATTTCAGAAACCAATTAATCCATATGGAAAAGCCAAGAAGATGGCTGAAG ATATCATACTTGATTTTTCCAAAAATTCTAAGATGGCAGTGATGATTCTGAGATACTTCAATGT
• Tissue: pods
• Gene name: LI_gene_188043;
• Additional information: details;

Expression of Ll_transcript_446507

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446507

• Blastp: Probable UDP-arabinose 4-epimerase 3 from Oryza sativa with 83.54% of identity
• Blastx: UDP-arabinose 4-epimerase 1 from Arabidopsis with 66.67% of identity
• Eggnog: udp-glucose 4-epimerase(COG1087)
• Kegg: Link to kegg annotations (4344584)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426467.1)
• Pfam: NAD dependent epimerase/dehydratase family (PF01370.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;