| Id Trinity | TRINITY_DN51858_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_446615 |
| Sequence | ACCAAAACCGTTTTTAAAAAGGGAAATAAAAATAAAAAATCAGAAATAAAAAACCAAAAAACGGAACGAAGAGAGAAAGAAACTCCATTCAGATCGGACA CCTTGTCTGAAACGCAAAACCTCACACCCTTTTTCTCTTTCCCCTTTTCAATTTCTCCATTTTTTCATTTTTCATTTTTCATTTTCACATTCTTATTTCA ATTTCCCATCTTTTCATTCCCAATTTTATGTAATCTGTGAAATATTTTCTGATTTTGGCGCCACCCGATTTGGAATAGTTGCAAATTTGAGTTTATGGTG GCGATTTTCGGTTTGAATTTGTGAGGTTTTTGTGATTTTTGTTTTGCTTGTAGATCCAGTGGGTTTGTCTTGAATGGCGTCTGCTCAGGTGCTTCCGAAT TCACGGAAGCAAGAGCATCTTGAAGCTGGGAAGCGCCGGCTTGAGGAGTTCCGTAAAAAGAAAGCTGCAGAGCGAGCCAAGAAGGCTTCGTCTTCTAGCA ATATTCCGTATTCCGATGCTAGCCTGAACCGAAAACAACCTTCTGAAATTGAGAATGTTCGAGTCAATGAGTCAGACGGAATTACCACCTCTGATGGTAT CGGAGGAGCTGTTGTTCATACAGTACCTTCAGGGATAGGCAATGATAAGAGCCCGAATATGGTTAGCCAAAGTAGTAATCAAGGATCTTTGGCTGATAGA ACTAGTTTTGATAGGAATGATGTTAATACATTATCTACTAGTCTGGTGGAGGCACATTCAGATATTGACGAAACTAAGAGATTTAATGCTTCTGTTGCTA CTGCATATGCAGATGTTAATCAAAAGAATGAGGCAAATAACGCGAATGACATATATGAAATTCATACTGGTGGTTCTGGTGGAATTCATACTGGGATGAC AAACAACCAAAGTCTTCATCTACACTTGCAAGAAAGTCAAGAGTATGGTAGCAATACTACTCAATCTAGTCTTCAAGGGATTAACGAATACCAGTCAAAT AAGACGAATAGTTCTTTGAAGGATTGTGCAGTTTCTGATCATAGCTCTTCTCCTTATTTTCCTTCAAAAATTTCACCTCAAAACTCTGTTGATACATCAC TGCAAATTAAGCCAACAAATTCCAGTTCTTCAGACAGCTATGCACATGGTTCACATTCTGGAGGCTTTAGTAATTATATCAGTTCTAAGTTTAGAGAGAC CACCACTAGCTCTGATAGCAATTTGTCTAACCTTCGTGGTGCAAGTATACCAATGTTCGATTCCAAAGTTTATGAAGCGAGCAATTCTGATAACCATACT TCAGTAAATTCCATGTCAACAGAATCTAGTTCTAAGAGGTCTCGTCCATCTTTTCTTGATTCTCTAAATGTCACTAGACCTTCCTCAGGGTCTCCATTTC AGCAACCTGAGAAAGATTCCTCAATGCCCAATCATTCAGAACCAAGCTACAAGGATATATCAGGATATTTCCATAAGCCATCTGAAGAGACTAAAACTGC GGCACCTTTTTCAAAATTTACAACCACAAGTTCTCATAGTTCATTTGGGAGTGCAAGCCCTTCGGTTTATAATAATAAAAGCAGTCATGACATGCTGATG ACAAGTACTAAGGAAAATGGCATGGATAAGAAGCATGATTATTACGCACCTTCAAAGAATGAAGACTTCACTGCTTTGGAACAGCATATTGAAGATCTGA CCCAAGAAAAATTTTCTTTGCAACGTGCTCTTGAGGCTTCTCGTGTATTGGCGGAGTCACTAGCTTCTGAAAATTCATCTCTGACTGATAATTATAATCA ACAGAGAAGTGTTGTCAACCAATTAAAGTCGGACATGGAGAAGTTACAGGAAGATATCAAAGCTCAACTGGTTGAGCTGGAGTCTATCAGAAATTTGTAT ACAAATGCACAACTAGAGTGTAATGCAGCCGATGAGCGTTCCAAGTTATTGGCATCTGAAGTTATTGGTTTAGAGGAGAAGGCACTGAAACTAAGATCCA GTGAGTTGAAGCTTGAGAAGCAGTTGGAAAATGCACAAGCAGAAATTTCTTCATACAGGTATTTTGAGGATTTAATTTACTGTATTGTACCAAAGGTAAT GTGATTGAGGATTTATTGTTGTATAGAACTTTTTATTTATAAAACTATTATTGTAAGACTTGAGTTTTATGATTTGGAATATTCGTCCAAATGTTCCCTT TCGTGACTGGGGCAGAGACACTAAAATTAGTTTTACCATGAAGTAATTGTTATTTAGAAGCTCAACACAATGGTAAGGTTGCTACTAAGTGACCAAGATG TCATGGATTCAATTACTGAAAACAGACCCTCCACTTGCGGCTGCGGGGTAAAATTGTATACAATTGTACATCTATCCTCCCCTTATCCTACTAGGTGAGA GCATTATGTATTGGACTGCCATTTTTATAAAGTAATTGTTATTTCTGGCAGAAGTACTATTTGAACCATAATTTCAATTCTGTTTGGGCCCTGAAGGTGG CAATTTGGATTCTAAATTTATTGTTTCGGGACCTCTGCAAATATTATTCAGTGACATTGAAACAAACTTTAAAATGTTGTGCTTTTTCCATATAACAATT TTACTCGATGACATTTGGTATGATGCCAGCTTCTTATTTCCTTCAATTGTTGATTATCTTGACTGTTTTATCCAAAGATTCCAGGGCAGTAATATAAAAT AGGATTTCATGAATATTTCAGGAAGAAAATGTCTAGCCTTGACAAAGACCGCCAAGATATGAAGTCGACCATTGGTTCTCTTCAAGAGGAGAAGAAGGTG TTGCAGTCTAAGCTGCGGAAGGCTGCAGGAGTTGGGAAATCTATTGAGAGTCAAATTAATAAAAGGGACGCTTCTACATCTACAGAAGATATAGGTGAAA ATACTGCCGAAAACTCTTCCAACCAAGAAATCAATGATTCTTTGGCTGTTCATGATGCTGAAGCTTCTAGTTTGTCCTCTGTTCCAGAATTTGGATACTC ATCTTTTGGAGTTTCTCCTGTGAATATTCCAAATGATCAGATGAGAACGATTGAGAACATTAATGCACTTATTTCTGAGCTGGCATTGGAGAAAGAAGAA TTAACGAAAGCCTTGACATCTGAATCATCCGAGTGTTCCAGGATGAAGGCGATAAACAAGGAGTTGTCCCGAAAACTTGAGATCCAGACCCAAAGATTAG AGCTTTTGACTGCTCAAAGCATGGTTAATGAACATATCCCAGCAAATCAACCAGATTCTCACATTATCTATGAGGATACCCCATATGCAGATGAGGGTGA TGAGGTGGTGGAAAGGGTATTGGGGTGGATTATGAAGCTGTTTCCGGGCGGACCTTCAAAACGAAGAACGAGCAAACTTCTTTGATTGAATTTCCGATGG ACTTCTACCACCAAAGTTTCCAGTTATTGGGATGGGTTATGAAGCTGTTATGCCACCAAGGTGAAGAACCAGCAAAACTTCAACCCAGATTCGTCTAACC TGTCAAAGTCTTTGGAGTTGCTTATTGTTTCTTGTCACCTCCTCGATACTGTGGAGGCTGTGATCTGTATAGTTTGAGTGAGTCGTGAATTCGGCCACAT TTATTTTGGAAGATGGCAATAAATTCTGTAGCGATTGAAGTACAAATTTTGTGCAAATAGTAGTTGGATATAAGAGACTACCTGGACAGTACAGACCAAT TGGTCTAGAAAGAATGAGATGTGGGAATGTTTGTTTAATGTATGCGAATTACAACTGAAAAACATTATGTATAGATAACCTGTGACTTTTGAACAATTTT ATTACCACTTATTTGAATGGTAAGTTTGATTGACATGAATGTGCAAAAATAGTGATGTCAAATAGTTTCAACTCGCATGATGTTTAGTTAATTTCACTGC CAAGAAATTATAAGTGTAATTGACTCTTGTTCAAGCATCTTCAATGAGACATTTCTGATGTATGTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_188099; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446615
| Blastp | Protein BLISTER from Arabidopsis with 52.99% of identity |
|---|---|
| Blastx | Protein BLISTER from Arabidopsis with 54.82% of identity |
| Eggnog | NA(ENOG4111GN4) |
| Kegg | Link to kegg annotations (AT3G23980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449994.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |