Id Trinity | TRINITY_DN51858_c3_g2_i3 |
---|---|
Name Transcript | Ll_transcript_446616 |
Sequence | TGTAGTTCGATCCATGTAGCCAACCCCACCTATGAGATTAAGGCTTGGTTGTTGTTGTTGGTTTGTGTTAGTACTTGATTCCTTTTTATTTGGGCATTAG AGTATGTTTTTGAGCTGTAATTGTTGCTTTATCTTTACTTTGGAGGTAGCATAGTCGTTTATCGGGATGTAAAACATTCTTCTACTTTGTTTTTACTATG TTTGTTTATATCTTTATAGAGAAGTGTTGTCAACCAATTACAATTGGACATGGAGACGTTACAGGAAGATATCAAAGCACAACTGGTTTGTATCAGGATC TCCCTATCTTATTGCGTAACATTGCTGCTATTTCATATATAATTATCCACAGTGTAGCTTTGCATGTTCATGCACACAAATGTTTACATTTATAATACTT CATAATATGCTTATAATTTATATTAGTCATATGATGACAATAACTTTAAACATATTCATTTATTGTCACAATGTCATAAATGAATTATATTTATTGTTAA TCAAGCTGTCTCACAAGATTTTGAGATGAATATAGGGGTATTTGAACTCGGGTGAAATTATATAATGGAGCCTCATATCAAACTTGATGTAGAACTAATC AAGTATCTAATGTAGCTCGTTTGGATTACTGTCCCAAGTCTTTGGTAAATAAGAAGGTCGTCATTAGATAGATTGGATGGCTGAGTATCTTTTTGTATGC AGTACAAGGTTTCTTGAAATGTGACTTCACCAAGGGCAATTTTTAGCTTTCTTTTCTTCCTCAGTCTGTGTGATAGAAAAAGTCGTATGTCATCATCAAA GAGTATTCATTGTCTTCTATTCAATCTTTCTAGGAGTCTCTAAGAGTAGCCTTTCATATTTTTTATATGTGAAACTATGAAACATCCGTTTGTATCCAGT ATGTCGATACACATACTTTTTAAAATATATGATACATACGTTTGGGGATACTTGTATAAAAATACTTAAAGTTCATAAAATATAATACTTATAATTGAAT ATCCAAATCCAAACTAGAAGTAAACTTGGACATTATTTGATATAAAATAGAAATTGCAAGTCCATTATCTTTGGGCAGCGAACAGCAGGCAGTGGCTGAA AGATGAAGCAACAATGTTGATGCTTGAATTGAAGATGGTCAATACTTGAGAGAAAGTAAATTCAGTGTATGAAGATTGAAGAGATTGAGGAAACCCTTCA TTGTAACCCTCTAATTGTTGCATGGTTTTTGGGAAATAACAAATTCTGAAGCACTCTGTTATTTTTTTTTTTATGAAAACGAATCGGCGATGCCATTATC TCGCATCAGATGTGTATCATAGACAAATTGAAGCATATTAATATCAGATACATGTTCGGTACCGATATGCGAGGCAAGGCGACATATGTGTTTCACAGTG AAAAAGCATGTGTTATCTTGTTAGTGTACCACATTTATGCCCTCTCTGTGTTTAGTTTCATTGGAAATCTTGATATTGGGTTATCATTTGACAACCTGCT CAAATTCTCATTGCGTGCGTGTTTTTCCTGATATCTAAGATTTTCATTGTCCTGTTTTGGGGTTCAACTTTTTATTGCAATAACCTGATTTCTATGCATG GATCCATAATTGCTTTCAATTTAATGCTTTGTCCCTCTGCCATTGGTATATATGTAAACTTTCATTTCAACAGGTTGAGTATGAGTCTATCAGGAATTTA TATACAAATGCACAGCTAGAGTGTAATGCAGCTGATGAGCGTGCCAAGTTATTGGCATCTGAAGTTATTGGTTTAGAGGAGAAGGCACTCAAACTAAGAT CCGGTGAACTGAAGCTTGAGAAGCAGTTGGAAAATGCACATGCAGAGATTTCTTCATGCAGGAAGAAAATGTCTAGCCTTGACAAAGATCACCAGGATAT GAAATCAACCATTGATGCTCTTCAAGAGGAGAAGAAGGTGCTGCTGTCTAAGCTGCGTAAGGCTCCAGGAATTGGGAAGTCTATTGAGAGTCAAAGTAAT AAAAAGGACGTTTCTACATCTACAGAAGATATAGCAAATGAAAACACTGCTGGAAACTCTTCCAACCAAGATATCAATGATTCCGCTTCTGTTCATGATG ATAGCTCCTCTAGTTTGTCTCTAGTTCCTGAAATTGGACAGTCATCTTTTGGAGTTTCTCCCGTGAATATTCCTCATGATCAAATGAGAAGGATTGAGAA CATCAATGCACTTATTTCTGAGCTCGCATTGGAGAAAGAAGAATTAACGAAAGCCTTGACATCTGAATCATCAGAATGTTCCAAGATGAAGGCGATAAAC AAGGAGTTGTCCCGCAAACTTGAGATCCAGACTCAAAGATTGGAGCTATTGACTGCTCAAAGCATGGTTAATGAAAATATTCCAACAAATCAACCAGATT CTCACACTATCTATGAGAACACCCCATATGCAGATGAGGGTGATGAGGTGGTGGAAAGGGTGTTGGGATGGATTATGAAGCTGTTTCCTGGTGGGCCTTC AAGACGAAGAACTAGCAAACTTCTTTGATCGGATTTACATTGAACTGCTAATTATTATCACCAGAGTCTACGAAGTTATTCGGATGGATTATGAAGCTGG TATGCCACTAAGATAAAGAACCAGCAAAACTTCAATTCAGATTCATGTCCTGTAACATGTTAAAGTCTTTGGAGTTGCTTTTCGTTTCTTGTCGCCTCCT CAACACAGTGGAGGCCGTGTACTGTATATTTTGAGTGAATCATACAACAAATTTTCAGAGCTCCTTATCGATTGAGGAATCCGGCTGCAATTATTTTGGA AGATGGCAATAAAATCTGTGCTGTGATTTTATCTCCTGAATCTTGATTTAATTACAAATTTTGTGCAAATAGTAGTTGGATATGAAAGACTACCCAGAAG CCTGGTGGGAGAGAAGGGACCAATTGGTCCAAAAAAGAATCTAATGTGGGAACTTCTGTTAAGGTACAAATGAAAAGTTACATTATATAGTGGATGTTTG TATTTTTTCTTTTTCTTAGCGGTAGATAACCTTTGACTTGTGAGCAATTCCATCTTAGTAACCACACATGGAAAAAACAACATTTACCAGTTATTTTTAT GGTAAGACTCTAACATTTATGTGCAAAAATAGTTGCGTTCCTGCTGTGACATAATATCAAGTAGTAT BLAST |
Tissue | pods |
Gene name | LI_gene_188099; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446616
Blastp | Protein BLISTER from Arabidopsis with 56.25% of identity |
---|---|
Blastx | Protein BLISTER from Arabidopsis with 56.9% of identity |
Eggnog | NA(ENOG4111GN4) |
Kegg | Link to kegg annotations (AT3G23980) |
CantataDB | Link to cantataDB annotations (CNT0002034) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413580.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |