| Id Trinity | TRINITY_DN51858_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_446618 |
| Sequence | ACCAGCCTGGGCAACTTAGTGAGACCTGATCTCTACAAAAATAAAAATAAAAATAAAAAAACGTTTTCAGAAAAGGAAAATAAAAAAAGAAATAAGAAAT CCCAAAACTGGAACAAAGAGAAAGAAACGATTTCACCCAATCATCGATTCTCTCTCTCTCTCTCTCCGATCAGATCGGGCACCCCTACCCCTTGTCTGAA ACACAAAACCTCATACCCTATTTCCATTCCCCTTCTTCAATTTCTCAAAATTTTCAATTTTTTACTTTGTAATTTCAATTTCCCTTATTTTTCATTCGCA AATTTTATGTGATCTGTGAAATACGCTGTGCATTTGGTACAATTTGATTTGGATTCGTTGCGAACTTGGGAATTGGCTCTTGATTTTCGGTTTGAATTTG TGAGGTTTTTGAGTTTATTATTGTTGCAGATCCAGTGTGTGGGTTTTGAATGGCGTCAGCTCAGGTGCTTCCGAATTCGCGGAAGCAAGAGCATTTGGAA GCTGGCAAGCGCCGGCTTGAGGAGTTTCGTAAAAAGAAAGCTGCAGAGCGGGCCAAGAAGGCTGCGTCCTCTAGCAATAATGCCAATTCTGATGCTAGCC TAAACCAAAAACAACCTTCAGAAATTCAGAATGTACGAGTTAATGAATCAGATGGAGTTACCACATCCGATGGTATTGGAGGAGCTATTACTGACACATT ACCTTCAGGGATGGGCAATGACAAGAGGCCAAATATGGTTAGCCAAAGTAGTAATCAAGAACCTTTGGCTGATAGAAATAGTTCAGTTAGGAATGATCTT AATACATTGCCTACTATTCCAATGGAGGCATATTCAGATATTGACGAAACTAAGAGATATAATGCTTCTGTTGCTACTGCATATGCAGATGTTAGTCAAA AGAATGAGGCAAATAATGTGTATGACATATATGGAGTTCATACTGATGGCGTTGGGGGAATTCCTTATGGGACGACAAACAACCACAGTATTCTACTACA CTCGCAAGGAAGTCAAGAATTTGGTAGCAATGGTACTCAAACTAGTCTTCATGGGATGAATGATTATCAGTCAAATAAGAGTAATAGTTCTCTAAAGGAT TATGCAGTTTCTGATCATGGTTCTTCTCCTTCTTTTCCCTCAAAAATCTCACCTGAAAACTCTGTTGATACACTACTGCAAATTAAGCCAACAATTTCTA GCACTTCAGACTCCATCTATGCACACGGTTCACATTCTGAAGGCTTTAGTGATTCTTTAAGTTCTAAGTTCAGAGAGACCATAACTAGCTCTGGTAGTGA TTTGCCTAACCTTCCTCGTGCAACTATACCAAGGTTTGAATCCAAAGATTATGAAGCAAGTAATTCTTTTAATCATACTCCAATAAATTCGGTGGCAACA GAATCTAGTTCTAGGAGGTCTCGTCCATCTTTTCTTGATTCTCTAAATGTCTCTAGACCTTCTTTGGAGTCTTCATTTCGGCAACCCGAGCAAGATTCCT TTATGTTCAGTCATTCAGAATCAAGCAACAAGGATATATCAGGATCTACTCATTTCCATAAGCCATCTGAAGAGACTAAAACTGTGGCACCTTTTTCCAA TTTTACAGCCGCAAATTTTCATAGTCCATTAGAACATAATGCAGGCCCTTCAGTTTTTAATAATAACAGTCAAAACATGCTGATGACAAGTGCTAAGGAG AATGGCATGGATAAGAAGAATGATTATTACTCACCTTCTAAGAATGAAGATTTTGCTGCTTTAGAACAGCATATTGAAGATCTGACTCAAGAAAAATTTT CTTTGCAACGTGCTCTTGAGGCTTCTCGAGTACTGGCGGAATCACTAGCTGCTGAAAATTCATCTCTGACTGATAATTATAATCAACAGAGAAGTGTTGT CAACCAATTACAATTGGACATGGAGACGTTACAGGAAGATATCAAAGCACAACTGGTTTGTATCAGGATCTCCCTATCTTATTGCGTAACATTGCTGCTA TTTCATATATAATTATCCACAGTGTAGCTTTGCATGTTCATGCACACAAATGTTTACATTTATAATACTTCATAATATGCTTATAATTTATATTAGTCAT ATGATGACAATAACTTTAAACATATTCATTTATTGTCACAATGTCATAAATGAATTATATTTATTGTTAATCAAGCTGTCTCACAAGATTTTGAGATGAA TATAGGGGTATTTGAACTCGGGTGAAATTATATAATGGAGCCTCATATCAAACTTGATGTAGAACTAATCAAGTATCTAATGTAGCTCGTTTGGATTACT GTCCCAAGTCTTTGGTAAATAAGAAGGTCGTCATTAGATAGATTGGATGGCTGAGTATCTTTTTGTATGCAGTACAAGGTTTCTTGAAATGTGACTTCAC CAAGGGCAATTTTTAGCTTTCTTTTCTTCCTCAGTCTGTGTGATAGAAAAAGTCGTATGTCATCATCAAAGAGTATTCATTGTCTTCTATTCAATCTTTC TAGGAGTCTCTAAGAGTAGCCTTTCATATTTTTTATATGTGAAACTATGAAACATCCGTTTGTATCCAGTATGTCGATACACATACTTTTTAAAATATAT GATACATACGTTTGGGGATACTTGTATAAAAATACTTAAAGTTCATAAAATATAATACTTATAATTGAATATCCAAATCCAAACTAGAAGTAAACTTGGA CATTATTTGATATAAAATAGAAATTGCAAGTCCATTATCTTTGGGCAGCGAACAGCAGGCAGTGGCTGAAAGATGAAGCAACAATGTTGATGCTTGAATT GAAGATGGTCAATACTTGAGAGAAAGTAAATTCAGTGTATGAAGATTGAAGAGATTGAGGAAACCCTTCATTGTAACCCTCTAATTGTTGCATGGTTTTT GGGAAATAACAAATTCTGAAGCACTCTGTTATTTTTTTTTTTATGAAAACGAATCGGCGATGCCATTATCTCGCATCAGATGTGTATCATAGACAAATTG AAGCATATTAATATCAGATACATGTTCGGTACCGATATGCGAGGCAAGGCGACATATGTGTTTCACAGTGAAAAAGCATGTGTTATCTTGTTAGTGTACC ACATTTATGCCCTCTCTGTGTTTAGTTTCATTGGAAATCTTGATATTGGGTTATCATTTGACAACCTGCTCAAATTCTCATTGCGTGCGTGTTTTTCCTG ATATCTAAGATTTTCATTGTCCTGTTTTGGGGTTCAACTTTTTATTGCAATAACCTGATTTCTATGCATGGATCCATAATTGCTTTCAATTTAATGCTTT GTCCCTCTGCCATTGGTATATATGTAAACTTTCATTTCAACAGGTTGAGTATGAGTCTATCAGGAATTTATATACAAATGCACAGCTAGAGTGTAATGCA GCTGATGAGCGTGCCAAGTTATTGGCATCTGAAGTTATTGGTTTAGAGGAGAAGGCACTCAAACTAAGATCCGGTGAACTGAAGCTTGAGAAGCAGTTGG AAAATGCACATGCAGAGATTTCTTCATGCAGGAAGAAAATGTCTAGCCTTGACAAAGATCACCAGGATATGAAATCAACCATTGATGCTCTTCAAGAGGA GAAGAAGGTGCTGCTGTCTAAGCTGCGTAAGGCTCCAGGAATTGGGAAGTCTATTGAGAGTCAAAGTAATAAAAAGGACGTTTCTACATCTACAGAAGAT ATAGCAAATGAAAACACTGCTGGAAACTCTTCCAACCAAGATATCAATGATTCCGCTTCTGTTCATGATGATAGCTCCTCTAGTTTGTCTCTAGTTCCTG AAATTGGACAGTCATCTTTTGGAGTTTCTCCCGTGAATATTCCTCATGATCAAATGAGAAGGATTGAGAACATCAATGCACTTATTTCTGAGCTCGCATT GGAGAAAGAAGAATTAACGAAAGCCTTGACATCTGAATCATCAGAATGTTCCAAGATGAAGGCGATAAACAAGGAGTTGTCCCGCAAACTTGAGATCCAG ACTCAAAGATTGGAGCTATTGACTGCTCAAAGCATGGTTAATGAAAATATTCCAACAAATCAACCAGATTCTCACACTATCTATGAGAACACCCCATATG CAGATGAGGGTGATGAGGTGGTGGAAAGGGTGTTGGGATGGATTATGAAGCTGTTTCCTGGTGGGCCTTCAAGACGAAGAACTAGCAAACTTCTTTGATC GGATTTACATTGAACTGCTAATTATTATCACCAGAGTCTACGAAGTTATTCGGATGGATTATGAAGCTGGTATGCCACTAAGATAAAGAACCAGCAAAAC TTCAATTCAGATTCATGTCCTGTAACATGTTAAAGTCTTTGGAGTTGCTTTTCGTTTCTTGTCGCCTCCTCAACACAGTGGAGGCCGTGTACTGTATATT TTGAGTGAATCATACAACAAATTTTCAGAGCTCCTTATCGATTGAGGAATCCGGCTGCAATTATTTTGGAAGATGGCAATAAAATCTGTGCTGTGATTTT ATCTCCTGAATCTTGATTTAATTACAAATTTTGTGCAAATAGTAGTTGGATATGAAAGACTACCCAGAAGCCTGGTGGGAGAGAAGGGACCAATTGGTCC AAAAAAGAATCTAATGTGGGAACTTCTGTTAAGGTACAAATGAAAAGTTACATTATATAGTGGATGTTTGTATTTTTTCTTTTTCTTAGCGGTAGATAAC CTTTGACTTGTGAGCAATTCCATCTTAGTAACCACACATGGAAAAAACAACATTTACCAGTTATTTTTATGGTAAGACTCTAACATTTATGTGCAAAAAT AGTTGCGTTCCTGCTGTGACATAATATCAAGTAGTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188099; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446618
| Blastp | Protein BLISTER from Arabidopsis with 44.39% of identity |
|---|---|
| Blastx | Protein BLISTER from Arabidopsis with 56.9% of identity |
| Eggnog | NA(ENOG4111GN4) |
| Kegg | Link to kegg annotations (AT3G23980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413581.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |