Ll_transcript_447472

• Id Trinity: TRINITY_DN51863_c1_g4_i1
• Name Transcript: Ll_transcript_447472
• Sequence: GCCGACCCCAACTAGTGGGATTAAGGCTTGATTGTTGTTGTGTAAATTAATATGTTCAATGTTGAAATTTCCCATTTATGTTTTGTTCATGGGAAATGTA GTCGTTTGTTTTCTATTTTTTAAAAGGAACGAGTATTTTTATTATAGAGAAAATAAGTGAAGCATAACTAGGAGGATAAGATATCCTCCTATAGCAAAAA TGGAAAGAACTAGAAAAGCAAAAGATTCAAAGATGCAGCAAGGCTGCCCAACCTTTGTGGATATTAGTGAACACCCATTTTTGCCCCTTCAATCGGTCTT AACACTGTCAAACTGATGTTTCATTGTTGATGATAAGGAGTTACAAGGCTGTTTTTTTCAATTGCCAATAACTTAATTAAAAAGCTACAGCCATTTTGAA AGAGGACTTGGCATAATGTGAATCCAAGCTCTATGGCTCAGATTTACATCCTTGCTGTGAGTATCTGTGCCTGGGCTGTGCAGAATAGAGAGATATTTTA CAAGAATTGAGAGTAGGCCATAGTAAGAAAGGAATGAGGGTAGAGAATGTCTATCAAATTCAGTTATTATTAAGCACGAGGGGAGTGAGGAGAAGTATCT TTTGGCAAATCATTTGTTAGTTTTGGGCAGAGAGCATTAGATCTTTGTAGGATCCTAGTTCTGTGGGTACTAAAACATTGTTCTACACCATTTTCTCAGT TCTTTCCACATGAATATAATTTTGTTTTTCGGTTCATAAATTTGTTCTTACATTTCTTTGTTGATACTGGTTCGTATCACTTGCTTTGCTTCTTCTTTCT CCCTATTTTTTTTTTCTGGTAACACTTTGTAATAGCTTCTGCAATAACTTATAAGGGTTTTTGTCAGCCGGTAGCCAGCAATCGATCTGCAGAGATTCCT TCTTTTGATTATTTAACTCAGCCAATTGATGCGAGCACTAGTGTTCCTTACAATTTTTCAGAAAGTGATAGTCTTCAGACAGTGAACAATCAAGTAAATC CAATTGAGCACAGGAACCATCCTGTCTCTGCAAGTAACAATTTCGTCAATGACAAATTGCAAAGTCAGGACAGCTTTGGAATGTGGGTGAACATCATGTC TGATTCACCATGTTCAGTAAATGATTCAGCTCCTGAATCCTCAGTTTCATCTGTTCACGAATCTTATTCATCTCCGGTAGTCAATAATCAGCAATCTTCT CTGCCTGAACAAATATTTAATCTCACTGATGTGTCCCCTACTTGGGCGTCTTCCACTGAGAAATCAAAGGTCCTGGTGACTGGATTCTTTCATAAGGACT ATCAACACCTTTCCAACTCCAATGTATTGTGTGTTTGCGGTGATGTAAGTGTGGCTGTAGAAACTGTTCAGGTTGGTGTCTACAGATGCTGGGTATCACC ACATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTTGATGGCCATAAGCCCATTAGCCAAGTTGTTAATTTTGAGTATCGTACTACTGTTTTGCATGAT CCCGCAGTTTCTGTGGAACAGAAGGACAACTGGGACGAATTTCTACTTCAAATGAGGCTTGCTCATTTGCTCTTCGCTAAACAAAAGAGCCTTGATGTTT TCTCTAGTAATGTATCACCTAATGCACTAAAGGAGGCTAAACAATTCGCCTTAAAAGCGTCATACATTTCAAATAGTTGGCAATACTTGATCAAGTCAAC TGAAGACAAGAAAATTCCATTTTTGCAAGCAAAAGAAGCCCTATTTGGGACTGCATTGAAAAACAGACTAAAGGACTGGCTGTTGGAAAGAATTGTTTTA GGTTGTAGGACTGCAGAGTTTGATGCACAAGGCCAAAGTGTAATCCATTTGTGTGCAATTTTGGAATATACTTGGGCTGTTTCCTTATTTTTGTGGTCAG GATTGTCACTGGATTTCCGGGATAAATTTGGATGGACAGCTCTTCACTGGGCGGCTTATTATGGAAGGGAGAAAATGGTTGCAACTCTATTGTCTGCTGG GGCAAAGCCAAA
• Tissue: pods
• Gene name: LI_gene_188135;
• Additional information: details;

Expression of Ll_transcript_447472

FPKM

• PAB: 1.5
• PNAB: 4.2
• PS1: 8.6
• PS2: 4.2
• PS3: 7.2
• PW1: 5.6
• PW2: 6.5
• PW3: 6.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447472

• Blastp: Calmodulin-binding transcription activator 5 from Arabidopsis with 54.66% of identity
• Blastx: Calmodulin-binding transcription activator 5 from Arabidopsis with 49.48% of identity
• Eggnog: Transcription activator(ENOG410XS5M)
• Kegg: Link to kegg annotations (AT4G15200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464832.1)
• Pfam: IPT/TIG domain (PF01833.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;