Ll_transcript_447354

• Id Trinity: TRINITY_DN51864_c1_g1_i5
• Name Transcript: Ll_transcript_447354
• Sequence: TCCCCTCCCTCTCCTCACCTTTTCACCAAAAATAAGAAAAAAATAAAAAATAAAAAAACAATAATTTCTCCAAAGTTTCTGTTTTTTTTTTCGTTTCTCG TATCTAAACTACCGTACTCCGTATCCATCGTCTATCTAGGTTTTCTGTTTCTTTAATCGTTCTCAATAACAAGGGGAGAGGGAAGAGAAAAAAAACAGAA AAAGTAAAATCTCAAAAAAAATAAAATAGGAATTTAGAAATATCATTTTTACTATGGCTCAGGTTCAGGTTCAGCCTCAGAATGCGATGCAAGGTGGTCC AAACGGTGCTGCCAATGGTGCGAACCAGTTCGTGCCAACATCGCTTTACGTCGGAGATCTTGACCCGAGCGTCACCGATTCACAGCTCTATGACCTGTTC AACCAGTTGGGTCAGGTCGTCTCTGTTAGGGTTTGTAGGGACTTAACCACTGGGAGATCCCTTGGTTACGGTTACGTTAATTACAGCAATCCCCAAGATG GTTAGTTTTTTCCTTTCTCTTATTGAGAACTGGGTCTAATGAAAGTTTTAATCTTGTTTATACATGAATAATTTTCAGTGCATGGATGTTAGTCTATGTT TTTTACTATAATTTCATTTATAAGTCGCGGTTAAATCATGCTGTTTTTGTGTGTGTTAATTCATTGGTGAGAGATTCAAGCCTAGCTATTAGTTTTTGTG TACTGTTTTGCTATGGTGAAACTGAAACACTAGAAACAACTGAAGGTTGATTTAATGACATGTTTACTATATGATGATGTTGATATGTTCATAATGCTTG TTATTTTAATTGGGCTTTTATTGCTGCTCATCAAGCAGGTGTGATAAATTTGTTCTGGCATGATTTATTTTGTTGCTTTATAAATATTGATGTGCTTGCA AACAGACTTGCATGGTTGTGAATTGAATTTTTTGTTCACAGTAAAAGATGAAAACTTTGCATATTGTGTCCAAAGCTAAGCTTTTCTTAGTCAATTGTTT TGATGTTTGATTCTCCGGAGAGGGATAGCGTGTGGATTTTTTACTGCCTTTTATGTAATATGAATTTTTTAGGAAAGATATACCTTTTTCTATGTTTGGT AGAGCTTCCTTTTTCTTCTTATTTTTGTATTATGAGTTTTTTTATAATCTAAGCTTGTTTGCATAACTAGCTTATATTTATAAAGAAGCTTTTTACAAAG CTTCAAATAGGATGGGTTGTTTTTCCAGATTATAATCACAGATAAGTATAATCATAATCTAATTTCTCTGGCTATACCAAAAACTTGCTTGAACTACTGG ATGAGTTAATGTAAACTTGGCATTTTTCATTTGCGGGAGGAAGGCTTATTTGGAAGAGTGAGCTGTAGTAGCTTATGCTATAAATGCAGTATCTTATGGT AGCAACTAGCAACAAATCTTGATGAATGATGTAGGGTAATTGCGGGGTTGCCATGTTCTTCAGTTGGTGGGTTTTTACCAATAATGAGAAATTGAGGCTA CTTTTGTAGTTAAAGTTAACTAAATCCAGCATTGCAAATTCTGCTTACCAGAATGTCCTGGATGGTGTATGGCAGGAAACCTGAACCAACACTGAGCATG CTTAACTTTATTCCAAATGTGTGCCATTTTGCTTATGGAATTTGCAGTCTAAGCCTGGTTGTGGACTTGTGGTTCTTGGTCGAGTTCCAAACTATGAAGT AATCAGGTTTTCTGCTGTCAAGGAGCTAAGATCACATCATTTCATATAATATAATGTGAAATTATTGGCTAGATATCAGTTAGTTACCCTTAAAAAGGAA CCAAAACTGACATATACATCCCCATGAATTCCTTAGTCCTTTAATGCTACATGGTTTGCCACAGGAACTAATATACATTGCATTTCGAACTTAAGCAGGA TATGAAGTTCATTATTAAAATATTTTCAGGGATGATTTGTGTTCGTCATTGTGATCCATCTGATATTTATTGACTTCATACATTATAAGGCGTGGTTTGA AGAGTTATAACTATGTCGTGAAAACTTCGTTTAATGTGATTCTTACTAATCTAATTAGTTTTTGTACTCATTGATCTGGTCTTCACTTATGGTTTCTACA CGTGAGTAATAGACTGATAGTTTAATAGTTTTATGATGTTTTTGTAGATTTTTATCTATGTTTGGTTCCCTCTTTTTTACTTGCTGTTAGTAAGATACTC GCTACATGTTTACAGCTGCCAGATCATTGGATGTCTTGAATTTCACTCCTCTCAATAACAAGCCCATCCGCATCATGTATTCTCACCGAGATCCTAGTGT TCGTAAAAGTGGAGCAGGAAATATTTTTATCAAGAATTTGGACAGGGCAATTGACCACAAGGCATTACATGATACATTCTCTTCATTTGGGAGCATCCTT TCTTGCAAGGTGGCTACAGATTCATCTGGTAACTCAAAAGGCTATGGCTTTGTACAATTTGATAATGCAGAATCTGCCCAAAAAGCCATTGAGAAGCTGA ATGGTATGCTGCTGAATGATAAACAAGTTTATGTGGGACCCTTCCTTCGCAAGCAAGAGAGAGAAGGTTCAGCTGACAAGGCAAAATTCAACAATGTTTT TGTAAAGAATCTGTCTGAATCAACCACTGATGATGAACTAAAGAAGGTCTTTAGTGAATTTGGACCAATTACCAGTGCTGTAGTGATGAGGGATGGAGAT GGGAAATCAAGGTGCTTTGGATTTGTAAACTTTGAGAATACGGATGATGCTGCTCGGTCTGTTGAGGCTCTGAATGGCAAGAAGTTTGATGACAAAGAGT GGTATGTTGGCAAAGCTCAAAAGAAATCTGAACGGGAGCATGAATTGAAACTTAAATTTGAGCAGAGCATGAAGGAAGCCGCTGATAAATATCAAGGGGC AAACTTGTATGTCAAAAATTTAGATGATAGCATTGGTGATGAAAAATTTAAGGAGCTGTTCTCCTCTTTCGGTACCATTACCTCTTGCAAGGTTATGAGA GACCCCAATGGCATAAGTCGAGGATCAGGATTTGTTGCATTCTCAACCCCTGAGGAGGCATCTAGAGCTCTCTTGGATATGAATGGCAAAATGGTGGTAA GCAAACCTCTATATGTGACTCTGGCCCAAAGGAAAGAAGATAGAAGAGCTAGACTGCAGGCTCAATTTTCCCAAATGCGCCCTGTTACAATTGCACCCTC TGTTGCTCCTCGTGTGCCAATGTATCCACCTGGTGGTCCAGGTATTGGTCAACAGATATTTTATGGTCAAGGGCCTCCTGCTATGATTCCTTCCCAGCCT GGATTTGGGTATCAGCAGCAACTTGTGCCTGGTATGAGGCCTGGTGGGGCTCCCATGCCAAATTTCTTTATGCCAATGGTTCAGCAGGGACAACAGGGGC AGCGTCCCGGTGGAAGACGTGCAGGTGGGGTCCAGCAGTCCCAGCAGCCAGTTCCTCTTATACCACAGCAGATGCTTCCTCGGGGACGTGTGTATCGTTA TCCTCCTCCTGGTAGGGGTATTCCTGAAGGTCCCATTCCTGGGGTTGCTGGTGGCATGTTTTCTGTTCCATATGATGTGGGCGGAATACCAATACATGAT GCAGGACTCTCCCAGCAAGTTCCTATTGGAGCTTTGGCTTCTGCTCTGGCAAATGCTTCCCCTGAGCAGCAGAGGACGATGCTGGGTGAGAATCTTTACC CTCTCGTGGAACAGTTGGAGCCTGA
• Tissue: pods
• Gene name: LI_gene_188138;
• Additional information: details;

Expression of Ll_transcript_447354

FPKM

• PAB: 11.9
• PNAB: 39.2
• PS1: 28.9
• PS2: 27.5
• PS3: 22.3
• PW1: 38.2
• PW2: 35.2
• PW3: 31.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447354

• Blastp: Polyadenylate-binding protein 2 from Arabidopsis with 71.31% of identity
• Blastx: Polyadenylate-binding protein 2 from Arabidopsis with 77.12% of identity
• Eggnog: poly(A) binding protein, cytoplasmic(ENOG410XR5X)
• Kegg: Link to kegg annotations (AT4G34110)
• CantataDB: Link to cantataDB annotations (CNT0002568)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421446.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;