Ll_transcript_446846

• Id Trinity: TRINITY_DN51866_c0_g1_i4
• Name Transcript: Ll_transcript_446846
• Sequence: ATCACATGAAAAACAAATAATGCTAGTTTATGATTTTAGCTTATATAGTTAATATCAACTATTTGTCTTCTTTTATTTATTTATTCAGGTTTTGGAAGAA ATCAAAACCATAGGGAAGATATCAGGACCAACAGCTATAACTGGATTACTCTTATATTCAAGAGCTATGATTTCTATGCTTTTTCTCGGTTACCTTGGTG AAATGGAACTAGCAGGAGGTTCTCTTTCTATTGGTTTTGCTAACATCACTGGCTACTCTGTGATAGCAGGGTTAGCCATGGGAATGGAACCAATTTGTGG TCAAGCTTATGGAGCAAAACAAATGAAGATTCTTGGTTTGACCCTTCAAAGAACAATACTACTTCTTCTTTCAACTTCCATTCCTATCTCTTTCACATGG CTTAACATGAAGAGAATCCTCTTGTGGTGTGGCCAAGACCATGAAATATCTTCCATGGCACAAACTTTCATTCTATTTACCATACCTGATCTTTTCTTCC TCTCACTTCTTCACCCTCTTAGAATCTATTTAAGGACCCAAGGCATTACATTACCACTAACATATTGTTCAGCTATATCTATTATCCTTCATGTCCCTTT GAATTTCCTACTAGTTGTTCATTTCAACATGGGTATAACAGGGGTAGCATTGGCAATGGTTTGGACTAATCTCAACCTTTTTCTCTTCCTTTCATCTTTT ATCTACTTCTCAGGTGTATATAAAGATTCTTGGGTATCACCAAGCATGGATTGTCTTAGAGGTTGGTCTTCATTGCTTGCACTTGCTATCCCAACTTGTG TCTCAGTTTGCCTTGAATGGTGGTGGTATGAACTCATGATACTATTGTGTGGGCTCCTTGTGAATCCAAAAGCTACCATTGCTTCAATGGGAATACTCAT TCAAACAACTTCATTAGTCTATGTTTTCCCATCCTCTCTTAGCCTTGGTGTTTCAACAAGAGTTGGGAATGAGTTAGGTGCAAAAAGACCTACAAAAGCC AGGGTTTCAATGATAGTATCACTCTTTTGTGCTGTTGGTTTAGGCATAGGAGCTTTGATTTTCACCACCTTGATGAGGCACCAATGGGGAAAATTCTTCA CCAATGATCAAGAAATACTTGACCTTACTTCAATAGCATTGCCAATTATTGGCTTGTGTGAGCTTGGAAACTGTCCTCAAACCACAGGTTGTGGAGTCCT AAGAGGTAGTGCAAGACCAACTATTGGAGCAAACATCAATTTGGGTTCTTTTTACTTGGTGGGTATGCCTGTGGCTATTCTTCTTGGGTTTGTGGCCAAA ATGGGATTTTCTGGGCTCTGGCTTGGGTTACTTGCAGCCCAAGCCTCATGTGCAACTCTCATGCTATTTGTTCTCTTCACAACTGATTGGAATGCCCAAG TTGAAAGAGCAAAAGAGCTTACAAAAACATCCAATGCTGCTAATACCACTACTGCTACTTCTACAACATTACCAACATTCACAAAAGCAGAGTTGAACAA GAATGAACATGATGCTGCTACTACTCTTGAAGAGATAGTTATCTCAAATGATGAGGCTGCTAAGACATACCCACTTGAAACAGATCCACTCATCATAACT TCTACCAAACACACTGTAAATTAGTTGAAGTGTTAAACCATAGTTTCTTTGTGCCAACTTCTCCCTCTTATTTCTCACTGTATTAGAGCATACTAGTGGT TCATTCATAACGAAATAAGAACATTCTAAGGCTTGTTGATCATTGGAGGGGCATGTTGTTTCGATTCCTAAAGTTCAACTCATTCATAAATAGGAACGTT TCTTAGCTTTGCTTCATCCATAAAAAATAATAGAGAAAATTGTTTGATGAGAGAGTTTAATGTGAAATATAAATATGAGATATGTTTGTTGGGTTTATTT ATGGATACCATTATACCAATATAGTAAATTTTGGTTTAAGTTATTTAACTAGTTGGGAACTATAAACAAATATAAAGTACATAATAATAA
• Tissue: pods
• Gene name: LI_gene_188151;
• Additional information: details;

Expression of Ll_transcript_446846

FPKM

• PAB: 7.3
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.3
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446846

• Blastp: Protein DETOXIFICATION 48 from Arabidopsis with 77.73% of identity
• Blastx: Protein DETOXIFICATION 48 from Arabidopsis with 78.03% of identity
• Eggnog: Mate efflux family protein(COG0534)
• Kegg: Link to kegg annotations (AT1G58340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416038.1)
• Pfam: MatE (PF01554.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;