| Id Trinity | TRINITY_DN51868_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_446659 |
| Sequence | CCAAACTTGTGTAGATTTGTTTAAATGTTTGTGTTATATAATTAAACAACAAACTCTTTCACCAGACATTTCATTTTTCATTGATTCTCCTCCGCTCCGC TCCGCTCTACTCTGCTTTCTCTCTCTCTCTATTCTCTGTCTAATCCCAAAATATTTCTATCTCACCTTCCCCTTCCAACAAAACCAAACCCAATAATAAA CCCATTAAAATATAACAAACAAAAAACTTAATCAATAATTAGATTAGAAATTAGATATCTCTCATTCTTTCAATTTATTTCACTTGAAGAATTAAGTTTC CGATTCCTTCCATGGTGGCCAGAGGCGTGCCGGCCAAGACGGCAGCGGCGTTGGCCGCCGTTCTTTTCTCAGAAACTCAATCCTCCAACTGGTGGCGTGA TATCAACGACTCTCCCTTCTGGCAGGATCGCATCTTCCTCCTCCTCGCCGCGCTCTACGGCATCGTCTCCGCCGTCGCTCTCGTTCAACTTTTTCGAATT CAATTGAGAGTACCGGAATATGGTTGGACCACGCAGAAGGTCTTTCACTTTCTTAATTTTTTGGTCAATGGAGTTAGATGCTCAGTTTTCATTTTCCGTC GCGATGTGCAGAAATTACAGCCTGAGATTGTTCAACATATCTTACTTGACATGCCAAGTCTTGCTTTCTTTACGACTTATGCACTTTTGGTGCTCTTCTG GGCTGAGATTTATTATCAGGCACGTGCTGTATCCACTGATGGACTAAGACCGAGTTTCTATACAATCAATGCCGTGGTTTATATTGTTCAGATTGTACTG TGGTTGATATTATGGTGGAAACCTGTCAGTGTGCTGGTCATCGTGTCTAAGATGTTCTTTGCAGGGGTCTCTTTGTTTGCAGCCCTTGCCTTTCTTCTCT ATGGCGGAAGGTAATTATGTTTCAACTTCATATGATGTAATTTGGAATGAAATTAATTCATCCAGGGTGTAGATAACACTCACTAAGCAGGTACCACACA AAACAAGGGAGTAAACAACACATCTCTATGGAATGCTTAAGAAACTGAAAAAAAGATCAACTAGCATGCCACATTATTTTGTGAAAATAATTGGGCTGAA GTTTTCTCTCAATCTTTATCATGTGAATACTTCTTTGTTATCCTGATGAGCCTATCCAATTTTTGTCTTTTCTGTGTTTTTCGACAGACTATTCTTGATG CTGCAACGCTTTCCTGTTGAATCCAAAGGTCGACGCAAGAAGCTGCAAGAGGTTGGCTATGTGACCACCATATGCTTTTCATGTTTCTTTGTCAGATGTG TTATGATGTGCTTTAATGCATTTGATAAAGCTGCCGACCTTGATGTCTTGAACCATTCCGTTCTAAACTTCATATATTACTTGGTGAGTTTGTTTGTATT CATTTATTGTGCTTCTTTTATTCCCGTATTATTGCCTGCTGTGGTGCTGTTCAAGTTATAATTTCTGTGTCGTGCTCTCTTTTGGGCTCACCTGGTTAAT CTTGTTTTAAGCTGTGTTGACAGCTCTGACATTCCTTACCTGAATTGTGTTTTACTGTGCCAAATTCTCTGTTTTTTCCAATTTCCACTTTACTTATCTA TATTCAACTTTTTATTTTCTTGCTTGTGATTTGAGGTGAGCCTTGATTATTGGTAACATTATTTTTACCTGAAACCTAAATGGCAAGGGGGAATCAGTGA ATCTGATAATCAGCTATGAAGCACGGATACGGATATGTGTATCGGATACGATACGTATCCGATACGCGACACACATTTTTTCTAAAATATAGGATACGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188160; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446659
| Blastp | Protein TOM THREE HOMOLOG 1 from Arabidopsis with 74.5% of identity |
|---|---|
| Blastx | Tobamovirus multiplication protein 3 from Arabidopsis with 83.15% of identity |
| Eggnog | tobamovirus multiplication(ENOG41110A4) |
| Kegg | Link to kegg annotations (AT1G14530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459951.1) |
| Pfam | Protein of unknown function (DUF1084) (PF06454.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |