Ll_transcript_446660

• Id Trinity: TRINITY_DN51868_c0_g1_i20
• Name Transcript: Ll_transcript_446660
• Sequence: AATCACTTTTCAAAAACGATACAGTATATAAAAAACACAATCAACATATCTGATTATTACACGTTGTATTAATTATAAATAATAGCCACCAGCGCATCAC CACGTTAGATTTGATTCAGTGTAATAAAACGACAAACCCAGTAGTAAATAAAAATAAATATTTCAATTATTATCACAGAACAACAACAACTCTGTTTCTT TCTTTCTTCACCCTTCAATTTGAATATTGAAGGAGAAGAAAAAGAAAGAAGAATAAAGAAGCTTCCAATTTCATCATCAATGGTGACCAGAGACGTTTTT CTCTTCTCAGAAACTCAATCTTCGAATTGGTGGCATGATATCGACGTTTCTCCTCTCTGGCAGGATCTAATCTTCCACGTCCTCGCCGCCCTCTACGGCA TCGTCTCCGCCATCGCTCTTGTTCAACTTGTTAGAATACAATTGAGAGTACCGGAATATGGTTGGACCACTCAGAAGGTCTTTCACTTTCTCAATTTTTT GGTCAATGGAGTTCGGTGCTCAGTTTTCATTTTCCGCCGTGATGTCCAGCAGTTACAGCCTGAGATTGTTCAACATATCTTACTTGACTTGCCGAGTCTT GCTTTCTTTACCACTTATGCGCTTTTGGTACTTTTCTGGGCTGAGATTTATTACCAGGCACGTGCTGTATCTACGGATGGACTCAGACCATGTTTCTATA CAATTAATGCTGTGGCTTATATTGTTCAGATTGCTTTGTGGTTGATATTATGGTGGAAACCTGTCAGTGTGCTGGTCATCATGTCGAAGATGTTCTTTGC AGGAGTCTCTTTGTTTGCAGCCCTTGGCTTTCTTCTTTATGGTGGAAGGTAATTCTTCAATTTGAATGCTCCTCTTAATGTAATTTGGAATGAAATTAAT TCATCCAGGTTACAGAATAATGATCATTTAGTTAAGTGCCACTCAGACCAAGGAAATAACACAGAACAAATAGAAAGGAGCAAACAGAACACCAGAGGCC AAAACTTAATATTATCATTGAGCATATTTAACATCAAGGAGAGCCTCTGAAAATGAGTTCATTTTTTCCTAATCAAATTCACCTAAGTTGCATAAGTCGG TCATTACCTCAAGAATTGTGCCTCTTTCTTTTGATGAAAACCTTTAACATCTATCAAGTAGAACACCCTTTGCTCACCATGTGCCAACTAAGCCTGTTTA AATTTTATGTTTAGATTAATCATTGAATGTTATCCATGTTCTTGTGTAATGCATTATGCGATAGTAATCTACAGTTCTACACAGCCAGAAAAAAGCCAAA ATTTCGATAGAGTACAAGGGTGGTTGTTCAATGGAATAAAGTGATAGAAACCACTCAACCATCCAAGAATAAACCAGCATGCCGCAGCATTTTGGAAAAC AATCGTGCTAAAATTTGTGGTCTTGATCTTTATTATTGTGAAGTACATCTCAGTTGTCATCATTACCCCGTCCATTTTTGTAGCTTTTCTGTGTGTTCTT GACAGATTATTCTTGATGCTGCAACGATTTCCTGTTGAATCCAAAGGTCGACGCAAGAAGCTGCAAGAGGTTGGCTATGTGACCACCATATGCTTTTCAT GTTTCCTTGTCAGATGTGTTATGATGTGCTTTAATGCATTTGATAAAGCTGCTGACCTTGATGTCTTGGACCATCCCATTCTAAACTTCATATATTACCT GGTGAGTTTGTTTGTATTCATGTATTTGCCGCTTTTATTCCTTTTATTCCCTACTCTTTGTTTAGTGTTGTGATGTTCAAGTTATCATTTCTACATATGC CTTTGTTTTTAGCTCTCTTGTTTAATCATGTTGTAAGCTCTGACGTTCCTGCTTGAATATTGTTCTACTCTGCCAAAATCAGTTTTTTCAATTTACGTAT CTATATTCTACTTTTCTTTTCTGGTATGTGATTTGATGTGAGCCTTGATTATTGGTAAGATTGTTTTTACCTGAGACCTAAGCGGCAAGAGAGTTTGTGA ATCAAATAATTAGGCCACTACTGTTTCAAAAGCCTCTAACTCGTTGTTAGGGAAAATATCTTAACACACTTTTCAATCATATATAGAAAAATCCCTCCTT GAACAATGCTATTGATTTCCTGATGTCCATTTGAAAGGAATTGATTCTTTGTTGTTAGATATCACTAGTTGCAAGTTTTGTGGTGCTGTCGGAAGTTAAT TTACTCGATACACTTTACAATGATATAACCAGCATTAAGTTAGTCATTAATACTTTGCAGTTCATCTCAAGTGTGTTTGTTCATGTTCTGCTTGTCCAAG GTCTTTCAACTATTATTTTCATTACCTATTTCACATTTTTTGGGTGCAGTTGGTGGAAATATTGCCTTCTTCTCTGGTCCTTTTTATTTTGAGGAAGCTG CCACCCAAGCGTGGTATCACACAGTATCATCCAATTCGCTGAAAAGATCGAAGCATGCGGAGAAATGACTCAGGCGCCATTCATGGTTCTCTATTTTCAT GAATGCTTCTCACGCTGCAATGATAATTGCCATGGGACAGAGCAATATCATCAAATCATGGGATTCAAAGTTCTCCCTTTAGTTTTGTAGACTTTGAAAT GTGATATTTTATTGATTGTCTGGGCTGTGTTATATGTGATATTTGCACTGTCTGTAGGAAAATATATGGTTGCTTTTTTGAGGTTTAAGCAATTCAACAC AATGGGCAACCATTTTGGGAGAATGGGACAATGATATATTGTATAATAGTGTTTTACTTCTACAAATATGTGAAATGCACCTTTTCTTTGATTTTTCAGT CACGCTCCAACTAATTACATTCAGTTCTTTTGATTAGCCCCAGTTTCATTTTTTCTGGGAAGCTTAAATTTTCTCTTGGCTAAAGGCTTGTATTTACTTT GGCAGATTATACTGTTGGTGTTTTTTTCCCTTACATTTGAGGGTTTTCTCTGGCTGTGTAAGTTGTTTTGGTTTAAAC
• Tissue: pods
• Gene name: LI_gene_188160;
• Additional information: details;

Expression of Ll_transcript_446660

FPKM

• PAB: 5.1
• PNAB: 2.6
• PS1: 2.5
• PS2: 2.7
• PS3: 3
• PW1: 2.8
• PW2: 1.8
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446660

• Blastp: Tobamovirus multiplication protein 3 from Arabidopsis with 80.54% of identity
• Blastx: Tobamovirus multiplication protein 3 from Arabidopsis with 81.82% of identity
• Eggnog: tobamovirus multiplication(ENOG41110A4)
• Kegg: Link to kegg annotations (AT2G02180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464318.1)
• Pfam: Protein of unknown function (DUF1084) (PF06454.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;