Ll_transcript_446641

• Id Trinity: TRINITY_DN51868_c0_g1_i9
• Name Transcript: Ll_transcript_446641
• Sequence: AATCACTTTTCAAAAACGATACAGTATATAAAAAACACAATCAACATATCTGATTATTACACGTTGTATTAATTATAAATAATAGCCACCAGCGCATCAC CACGTTAGATTTGATTCAGTGTAATAAAACGACAAACCCAGTAGTAAATAAAAATAAATATTTCAATTATTATCACAGAACAACAACAACTCTGTTTCTT TCTTTCTTCACCCTTCAATTTGAATATTGAAGGAGAAGAAAAAGAAAGAAGAATAAAGAAGCTTCCAATTTCATCATCAATGGTGACCAGAGACGTTTTT CTCTTCTCAGAAACTCAATCTTCGAATTGGTGGCATGATATCGACGTTTCTCCTCTCTGGCAGGATCTAATCTTCCACGTCCTCGCCGCCCTCTACGGCA TCGTCTCCGCCATCGCTCTTGTTCAACTTGTTAGAATACAATTGAGAGTACCGGAATATGGTTGGACCACTCAGAAGGTCTTTCACTTTCTCAATTTTTT GGTCAATGGAGTTCGGTGCTCAGTTTTCATTTTCCGCCGTGATGTCCAGCAGTTACAGCCTGAGATTGTTCAACATATCTTACTTGACTTGCCGAGTCTT GCTTTCTTTACCACTTATGCGCTTTTGGTACTTTTCTGGGCTGAGATTTATTACCAGGCACGTGCTGTATCTACCGATGGACTAAGGCCAAGTTTCTATA CAATTAATGCTGTGGTTTATATTGTCCAGGTGCATTACAATCACAAATTATGTCTGAAGCATTTTCCCATTTCATTCATCCTGGTTAAATCTACGTGACC TCTCATCAGTCTCTCATCACTTTGTAAGATGGATGAGTGGTACTACACAATGCAACTTATGGTATGTTGTGTTAACATTGCCAACTCCCATCTTCCTGGA ATTTTCCTTCCATTTGCTCTAACTTTCTCAGCACAACTCCGTTTAGTATCGAATCCACTTAAGTATAATCATCTAGCGTTATTATCACCCACACAAAAAA AGAAGGTAAAAGAGCATCGGCACTAGCTCTTGGATCAGTTGGATGTATCTAGTAAGTATGTGCAATACCAATGTAAAAGTGTATGGACTCAAATTCGACC CTTGGTGCAAGCCGATTGCCACAGGAAAATATTTTGCTACACTGTCATTAATTTGCACAATAGTTGTTGCTCCAACATACATGTCCTTTATAACTATAAC ATATGCGATATTAGCTCCTTTCTTCTCTAGAACTCTAAGGAATTCTCATGGCACCGTATCATATAGTTTTTTAATATGAAAGTAGACCCTTTTCTAGGTC TTGGCTTAGTTCTATCATTTTCCTTCAAAGTCCAAAATAATTTTTCAGCCTCAACGATTGACATTCCTCTTATGCTACGTGGATAAAAAACACTCAATTG GGCTCCGTTGAAGTATGAAAATCATATTTTCTGCAAAATAATTTACTAACGTGATTGTGCTAAAAGACAATAATGACCTTATTTCGAAAAATTGGTATTA AAGTTAACCCAATTTCTGGTCAGGTTTGAAATCTCTACTAGTGCATTATTTTAGCATTGCTTTATTGTTTGTTTATATCATCTTGACCATAGAGAGTCCC CAAATCATGAGATTAATCATTAGTATTGGTAGAGGAATATCTTGGGTTTTTGCTGTATCCTGTGTATGGTTAAGAATATCTTGAGTTTTTACTTGAAGTG TAAATGTTAAGGTTGTAATAAGAAAATTTTGAATCATAATATTTGATCATCTGAGACTAAGTAAACTAGACTTACTACCTGCTATTTTTTATTAGGAACC CACCGACTTTCTTTTTATGTATAAAAAAGTTACCAATGTGGAAGGGATTGTAAGTAACTGAGGGCAGTTGTTAGGATCAATTACTGATACATTAGAGGTT CTAGCATTGCATAGCAATAGTGGAAGCGGTAGCAAAAGCTTGGCTGAAATCATGATTTAAATAGCTGCTACTCTCATGTTGAATAGTCTTGAATTGTTGA TTTAATTTCTTTTTATGTGCTTCAGATTGCATTGTGGTTGATATTATTGTGGAAACCTGTCAGTGTGCTGGCCATCATGTCGAAGGTGTTCTTCGCAGGA GTCTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTATGGTGGAAGACTATTCTTGATGCTGCAACGTTTTCCTGTTGAATCCAAAGGTCGTCGCAAGAAGC TGCAAGAGGTTGGCTATGTGACCACCATATGCTTTTCATGTTTCCTTGTCAGATGTGTTATGATGTGCTTTAATGCATTTGATAAAGCTGCAGACCTTGA TGTTTTGGACCATCCCATTCTAAACTTCATATATTACCTGTCGGTGGAAATATTGCCTTCTTCTTTGGTCCTTTTCATTTTGAGGAAGCTGCCTCCCAAG CGTGGTATCTCACAATATCACCCAATTCGCTGAAAAGCTTGAACACACGGAGAAATGACTAAAGCATCTTTCACCGTTCTTCATTTTAATGAATGTTTCT CACACCCCTATTATAATTTCCAGGGTACAGAGAGAAGTCAGTCTTTTCTATGTTGAGTGACAATGCTAATATATTGGGATTCAAGGCTCTCCCTTTAGTT ATGTTGATTTTGAAATGTGACATGTTGTGGATTATCAAACTTGCTGGACTGTGTTATATATGTGATATTTGCACTGTCTGTAAGAACATATATGGCTGTT TTTTGAGGTTGAGCAATTCAACACAATGAGCAACCATTTTGGGAGAATGGGACTCTGATATATTGTATTGTATAATAGTGTTTTACTGCTACGAGTTGGT AAAATGTATTATTGTTCTTTAACTTCTTTTCATTTTTCAGTCAAGTTCCAC
• Tissue: pods
• Gene name: LI_gene_188160;
• Additional information: details;

Expression of Ll_transcript_446641

FPKM

• PAB: 11.4
• PNAB: 14.2
• PS1: 11
• PS2: 9.4
• PS3: 13.8
• PW1: 18.1
• PW2: 22.5
• PW3: 24.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446641

• Blastp: Tobamovirus multiplication protein 3 from Nicotiana with 94.07% of identity
• Blastx: Protein TOM THREE HOMOLOG 1 from Arabidopsis with 76.16% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107769903)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464318.1)
• Pfam: Protein of unknown function (DUF1084) (PF06454.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;