Ll_transcript_445923

• Id Trinity: TRINITY_DN51869_c1_g1_i17
• Name Transcript: Ll_transcript_445923
• Sequence: GACGAAAAATATAAAGTTAATATATATTAAATTTAGTTTTACGAAGATTGAGTGATACACATTTTAAAAGAGAAGATGTGGTTCATGTAATACTAATGAT CGCGCATAGTGTGCATGTGCCATCATTTCTCTTAAAAATCTGAAGCTAGAAGCTAGTTACTACTACTAACTTTTTTCAAAAAACACATAACAAAACTAAA CTACACATAGATTCAGTTAAGAGAGAAAACAAAGGCGAACGAAACTGAAGAAGAACCAAATCTCTTCGATCATTTCTGATCCAATCCACAAATGAAGGCT ATTAACCCTCACATAACATTCGAACACAAGAGGGATGCATATGGATTTACTGTGCGACCTCAGCACCTGCAAAGATACCGCGAATATGCTAACATATATA AGGAAGAAGAAGAGGAAAGGTCAGATCGATGGAACTCATTTCTAGAACGGCAGGCTACGTCTTCTGAATTGGCAACAGAAAGATTAGGTGTGGAGGAAGA CGAGACAGTTTTGAGGGCTCAAGCTTCAGAGGAAGAAACTGATGATAACTTGAAAAAGGGTGTTGACGGAGATGAATTAAGCAGTGGGAAGCCTGGTTCT GATGGTACAGCTGAAAATGGTGGTCAGAAAGAGGAGGTACCGGCATCTGATGAGACTAAGGTTCATAGATCCCAATTATGGACAGACATAAGACCATCTC TTCGTACTATTGAGGATATGATGAGTACTCGTGTAAAGAAGAAAACTGCATCAGTAAACAATGTTGGAGATGGAAAATCACTGTCTCATATTGATGGTGC AAAATCACAAAAAGGAGCATACGAGGAAGACTCTGATGACGAGTTCTATGATGTTGAGAGGTCAGATCCTAGTCCAGATACGCCTCTAGTTGATAATACG AGTGTGTCTGCAAATGGTCTTGCTGCCGATGCTGCACCATCAGAAGCTCCATGCCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCATGGGGGAGTGCCAA TGGCACTGAGGGGAGAGCTTTGGCAAGCTTTTGTGGGTGTCAAAGCAAGACGCGTGGAGAAGTATTATCAGGATCTACTAGCTTCGGAGAATGAATCTGA AAGAAAAACGGATCAGCAAAGTATACAGTCAAAGGATGATAATGGGATACCCACGGCAGATCCTGTACCTGTGCCAGAAAAATGGAAAGGACAGATTGAG AAGGATCTGCCTCGAACATTTCCTGGTCATCCTGCTCTGGATGAGGATGGTAGAAATGCCCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCT CAGTTGGTTATTGCCAGGTCCTTGCTTCTGAAAAGAGTTACATTCTTCATTTTATCCTACTAATTTTTCGGTATGGTTGTGATGAGTTGTATCTCAAAAA CTATCTGTCAAATGATCATTGAAGATATACAAGTGGAACAAGCAAGTACCGTTTGAGGTACCATGCTTCAAGGTGGTAAGGGGACCCAGTGTTCAAGGGA CACCTTTCATATCTGTGCTGTGTATGCTTCATGAACATTAATGATCTGTCCTATAACGATAACATGGACAATGAAATGATTGAAGCCAAAAAGTATTAAT TTACTATATGCCTATCTACACACACATGTCATTTATGTTCATGACAGCTATGACTCACTGACTGAACTTGTTTGGATAACTTACACTGCAGGCCATGAAT TTTTTTGCTGGTTTATTGCTGCTTTTGATGCCTGAAGAAAATGCATTTTGGACCTTGATGGGAATTTTAGATGATTATTTTGATGGTTATTATTCTGAGG AAATGTTAGAATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCGGGAGAGGTTTCCCAAACTAGCCAATCATCTAGATTACCTGGGAGTGCAGGT AGCATGGGTTACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGTTCTTCGAGTATGGGATGTGCTTCTTTTTGAAGGAAAC CGAGTGATGCTATTTAAAACCGCTGCCGCTTTAGTGGATCTATATGGTCCAGCATTGGTAACAACTAAGGATGCTGGAGATGCAGTTACTTTACTCCAGT CATTGTCTGGCTCCACTTTTGATAGCAGTAAGCTTGTATTGACAGCTTGCATGGCTTACCAAAATATAAATGAATTTACATTGCAAGAGCTTAGGAATAA GCATCGTCCAGCTGTACTAGCTGCAGTTGAAGAAAGATCAAAAGGGCTTAAAGCTTGGAGGGATTCTAAGGGCCTGTCATTGAAGCTATTGTCTTTTAAA CATGATCCTAAAATAGAGCAATCAGGGAGTTTATCTCCTTCAGAATCTACTAATGCGGAGGATATTTTGATCAGTCTGACCGGGGAGGGTGACATAGATT CTGTTCCAGATCTTCAAGAGCAGATTGTCTGCTTGAAGGATGTACTTTGCAGATTACTAGAGGAGAAAAGATCGGCTATTCTCATAGCGGAGGAGCTTGA ATCAGCATTAATGGAGATAGTCAAGCATGATAATAGGCGGCAACTGAGTGCCAAGGTTGAGCAACTAGAGCAAGAGGTTGCCGAGCTTCGACAGGCACTT GCTGATAAGCAAGAACAGGAAAATGCTATGCTTCAGGTCTTAATGCGGATGGAGCAAGAGCAAAAGGTGACTGAGGATGCTCGTAGATTTGTTGAGCAAG ATGCAGCAGCACAAAGATATGCTGCCCAAGTGATTCAGGAAAAGTATGAAGAAGCAATTGCAGCACTTGATGAGATGGAGAGGAGAGCACTTATTGCAGA ATCTATGCTGGAGGCAACATTGCAGTATCAGTCTGATCAAGTTAAACTGCAACGATCTTCACAGGCAGAGTCTCCAGGTCGAAAGACTACAACTGATGGC CCTACTAAGAGGATAGGTTTGTTTGGATTTGGATGGGGTGATCGAAACAAGGGAAAACCCACTGTGGACAAGCCCATCGTTGCGGAACAAAGTGCAACCA ATAAGCCCATCACTGAAACACAAAGTGCAACCAATAAGCCCATCGTTGAGGCACAGAGTGCAACCAATAAGCCCATTGCTGAGGCACAAAGTGCAACCAA TAAGCCCATTGCTGAGGCACAAAGTGCAACCAATAAGCTCATCGTTGAGGCACAATCTGCAACCAAGCAACAAGACAAAGACGCGAATGGCCTTAAAGTA CAGGATGAATGATAGGAGATGAGATAGTAGCATGATCTTCTTTGTCCTTAGCAAGAGGTATGAGGAGCAAGTAGTTAATTCCTTTTCCTTGTCGGTCATT TTTGTTTAGGGTGAACATATATTTTGTATTCATTAATTGTTTGTTCTTTACGATGAAATAATATAGTAATTGGAAACAAGGTCAACTGTATATCTGTCGC GTTTATTCCATGAGTAAATCTTCAAATTTGTCCTTTGGCAAAATAGGAGGTCCATTTAATTAAAAATGTACAGTTCAAATACTACAAATCTGTGTTGTCG TCATATAAAACTAGCA
• Tissue: pods
• Gene name: LI_gene_188166;
• Additional information: details;

Expression of Ll_transcript_445923

FPKM

• PAB: 0.2
• PNAB: 4
• PS1: 4.2
• PS2: 3.3
• PS3: 4.7
• PW1: 3.5
• PW2: 3.1
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445923

• Blastp: Putative GTPase-activating protein AN11010 from Aspergillus with 34% of identity
• Blastx: Putative GTPase-activating protein AN11010 from Aspergillus with 34.65% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AN7784.2)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441616.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;