Ll_transcript_445926

• Id Trinity: TRINITY_DN51869_c1_g1_i20
• Name Transcript: Ll_transcript_445926
• Sequence: CGCTCTCATTTCTCCCCCAACAACTCACTACACACTAAAAATACTTTCAGTTAAACAGAGAAAACGAAGGCGAAAGCGAAGGTTAAGAAGATTAAGATTT TCTCAACCGAAAATTTCTCGCTTCAACGTTCGATTATTCGGATCCAATACTCAAATGAAGGCTATTAATCCTCTCATCACTTTCGAACACAAGAGGGATG TATATGGATTTACTGTGCGACCTCAGCATCTGCAAAGTTACCGTGAATATGCTAATATATACAAGGAGGAAGAAGTGGAAAGGTCAGATCGATGGATGTC ATTTCTAGAAAGGCAAGCAGAGTCTTCTGAATTTGCCACAGACAGATTAGGTGTTGAGGAAGATGAGACAGTTTTGAGGGCTCAAGCCTTAGAGCACGAA GCTGATGCTGGCACGGAGAAAGCTGTTGATGGAGATGAATTAGGCACCCAGAAGCCTGGTTCTGATACTACAGCTGAAAATGATAGTCCGAAAGAGGAGA CTGAAGTTGATAGAGTCCTATTATGGACAGAGATAAGACCATCTCTTCGTACTATCGAGGATATGATGAGCATTCGTGTGAAGAAGAAAACTGCGTCAAT GAAAACTATTGGAAACAAGAAGGGCATGTTAAAGGATGAACAGATTGTTGGAGATGGGAAATCACTATCTCATACTGATGGTGCAAAATCACGAAAGGAA GGGTTTGTGGAAGACTCTGACGATGAGTTCTATGAAGTTGAGAGGTCAGATCCTAGTCCAGATACACCTACAGTTGATGGCACGAGTGCCTCTGCAAATG GTATTTCTGCTGACACTGGAACACTTGAGGCTTCATTTCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCGTGGAGGAGTGCCAATGGCACTGAGGGGAGA GCTTTGGCAAGCTTTTGTGGGTGTAAAAGCAAGGCGTCGGGAGAAGTATTATCAGAATCTGCTAGCTTCAGAGAATGATTCTGAAAGAAAAATGGATCAG CAAAGCATGCAGCAGTCAACTGACGATAATGGGAAAACCAATGCAAATCCTGTATTTGTGTCAGAAAAATGGAAAGGGCAGATTGAGAAGGATCTGCCAC GAACATTTCCTGGTCACCCTGCTCTGGACCAGGATGGTAGAAATGCTCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCTCAGTTGGTTATTG CCAGGTCCTTGCTTCTGAAAAGAGTTACATTCTTCATTTTATCCTACTAATTTTTCGGTATGGTTGTGATGAGTTGTATCTCAAAAACTATCTGTCAAAT GATCATTGAAGATATACAAGTGGAACAAGCAAGTACCGTTTGAGGTACCATGCTTCAAGGTGGTAAGGGGACCCAGTGTTCAAGGGACACCTTTCATATC TGTGCTGTGTATGCTTCATGAACATTAATGATCTGTCCTATAACGATAACATGGACAATGAAATGATTGAAGCCAAAAAGTATTAATTTACTATATGCCT ATCTACACACACATGTCATTTATGTTCATGACAGCTATGACTCACTGACTGAACTTGTTTGGATAACTTACACTGCAGGCCATGAATTTTTTTGCTGGTT TATTGCTGCTTTTGATGCCTGAAGAAAATGCATTTTGGACCTTGATGGGAATTTTAGATGATTATTTTGATGGTTATTATTCTGAGGAAATGTTAGAATC TCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCGGGAGAGGTTTCCCAAACTAGCCAATCATCTAGATTACCTGGGAGTGCAGGTAGCATGGGTTACT GGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGTTCTTCGAGTATGGGATGTGCTTCTTTTTGAAGGAAACCGAGTGATGCTAT TTAAAACCGCTGCCGCTTTAGTGGATCTATATGGTCCAGCATTGGTAACAACTAAGGATGCTGGAGATGCAGTTACTTTACTCCAGTCATTGTCTGGCTC CACTTTTGATAGCAGTAAGCTTGTATTGACAGCTTGCATGGCTTACCAAAATATAAATGAATTTACATTGCAAGAGCTTAGGAATAAGCATCGTCCAGCT GTACTAGCTGCAGTTGAAGAAAGATCAAAAGGGCTTAAAGCTTGGAGGGATTCTAAGGGCCTGTCATTGAAGCTATTGTCTTTTAAACATGATCCTAAAA TAGAGCAATCAGGGAGTTTATCTCCTTCAGAATCTACTAATGCGGAGGATATTTTGATCAGTCTGACCGGGGAGGGTGACATAGATTCTGTTCCAGATCT TCAAGAGCAGATTGTCTGCTTGAAGGATGTACTTTGCAGATTACTAGAGGAGAAAAGATCGGCTATTCTCATAGCGGAGGAGCTTGAATCAGCATTAATG GAGATAGTCAAGCATGATAATAGGCGGCAACTGAGTGCCAAGGTTGAGCAACTAGAGCAAGAGGTTGCCGAGCTTCGACAGGCACTTGCTGATAAGCAAG AACAGGAAAATGCTATGCTTCAGGTCTTAATGCGGATGGAGCAAGAGCAAAAGGTGACTGAGGATGCTCGTAGATTTGTTGAGCAAGATGCAGCAGCACA AAGATATGCTGCCCAAGTGATTCAGGAAAAGTATGAAGAAGCAATTGCAGCACTTGATGAGATGGAGAGGAGAGCACTTATTGCAGAATCTATGCTGGAG GCAACATTGCAGTATCAGTCTGATCAAGTTAAACTGCAACGATCTTCACAGGCAGAGTCTCCAGGTCGAAAGACTACAACTGATGGCCCTACTAAGAGGA TAGGTTTGTTTGGATTTGGATGGGGTGATCGAAACAAGGGAAAACCCACTGTGGACAAGCCCATCGTTGCGGAACAAAGTGCAACCAATAAGCCCA
• Tissue: pods
• Gene name: LI_gene_188166;
• Additional information: details;

Expression of Ll_transcript_445926

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 1.7
• PS2: 0.7
• PS3: 0.9
• PW1: 1
• PW2: 2.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445926

• Blastp: Putative GTPase-activating protein AN11010 from Aspergillus with 34% of identity
• Blastx: Putative GTPase-activating protein AN11010 from Aspergillus with 34.65% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AN7784.2)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441616.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;