| Id Trinity | TRINITY_DN51869_c1_g1_i25 |
|---|---|
| Name Transcript | Ll_transcript_445931 |
| Sequence | AAAATTTCCAATACTAACGGGACGCCATTTTCGCTCTAAAGGAGCGTAATGTGCATGCGCCACTTCTCTCTCCCTTGCGAAAACACAACCAACTACACAC TTAAAATTTCAGTTAACAGAAAATCAAGGTGAACGAATTTGAAGAATAATATGCTCTTCTCTTCTTCTCAACCAGAAATGAAGGCTATTAATCCTCTCAT CACATTCGAACAAAAGAGGGATGCATATGGATTTACTGTGCAACCTCAGCACCTGCAAAAATACCGTGCTTATGCTAAAATATACAAGGAGGAAGAAGAG GAAAGGTCAGATCGATGGATCTCATTTCTGGAAAGGCAGGCAGAGTCTTCTAAATTGGCCACAGACAGATTAGGTGTTGAGGAAGATGAGACAGTTTTGA GGGCTAAAGCCTCAGAGCAAGAAGCTGATGTTGGCACAGAGAAGGTTTTTGGTGGAGATGAATTAAGCAACCAGAAGTGTGGTTCTGATAGTATAGCTGA AAATGATAGTCAGAAAGAGGAGGCTAAGGTTCACAGAGTCCAGTTATGGTCAGAGATAAGACCATCTCTCCATGTTATTGAGGATATGATGAGCATTCGT GTAAAGAAGAAAACCACGTCAATAGAAGATGTTGGGAACAAGAAGAGTGTTTTAAAAGATGAACATATAGCTGGAGATGGAAAATCAGTATCTCATACGG ATGGTGCAAAATCACAAAAGGGAACATTTGAGGAACACTCTGAGGATGAGTTCTATGTTGTTGAGAGGTCAGGTCCTAGTCCAGATACACCTATAGTTGA TGGCACGAGTGCCCCAGCAAATGGTATTGATGCTGACACTGCACCACTAGAGGCCTCATTTCCTTGGAAGGAAGAGTTGGAAGTTCTTGTTCGTGGGGGA GTGCCAATGGCACTTAGAGGAGAGCTGTGGCAAGCTTTTGTGGGTGTAAAAGCAAGGCGCGTGGAGAAGTATTATCAATCTCTACTAGTGTCAGATGATG ATTCTGGAAGAAAAATGGATCAGCAAAGTACACACTCAAATGATGATAATGGAATAACCTCTACCAATCCTGTATTTGTGCCAGAAAAATGGAAAGGACA GATTGAGAAGGATTTACATCGAACATTTCCTGGTCATCCTGCTCTGGATGAGGATGGTAGAAATGCCCTGCGGCGATTACTTACTGCATATGCTCGACAT AATCCCTCAGTTGGTTATTGCCAGGTCCTTGCTTCTGAAAAGAGTTACATTCTTCATTTTATCCTACTAATTTTTCGGTATGGTTGTGATGAGTTGTATC TCAAAAACTATCTGTCAAATGATCATTGAAGATATACAAGTGGAACAAGCAAGTACCGTTTGAGGTACCATGCTTCAAGGTGGCCATGAATTTTTTTGCT GGTTTATTGCTGCTTTTGATGCCTGAAGAAAATGCATTTTGGACCTTGATGGGAATTTTAGATGATTATTTTGATGGTTATTATTCTGAGGAAATGTTAG AATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCGGGAGAGGTTTCCCAAACTAGCCAATCATCTAGATTACCTGGGAGTGCAGGTAGCATGGGT TACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGGTCAGGCTTTACGTTTTATCTATTGAGTAGTGTATCTTAGTTTTAAT CCATAAAGTATCCAATGTGAAATGAACATTTACTCTCTATACTTTGTGCCTCCTCATGACTAAAGTAATTATTTGGACTTCAGTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188166; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445931
| Blastp | TBC1 domain family member 8B from Danio with 38.03% of identity |
|---|---|
| Blastx | TBC1 domain family member 8 from Mus with 38.46% of identity |
| Eggnog | TBC1 domain family member(COG5210) |
| Kegg | Link to kegg annotations (566657) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441616.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |