| Id Trinity | TRINITY_DN51869_c1_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_445934 |
| Sequence | CGCTCTCATTTCTCCCCCAACAACTCACTACACACTAAAAATACTTTCAGTTAAACAGAGAAAACGAAGGCGAAAGCGAAGGTTAAGAAGATTAAGATTT TCTCAACCGAAAATTTCTCGCTTCAACGTTCGATTATTCGGATCCAATACTCAAATGAAGGCTATTAATCCTCTCATCACTTTCGAACACAAGAGGGATG TATATGGATTTACTGTGCGACCTCAGCATCTGCAAAGTTACCGTGAATATGCTAATATATACAAGGAGGAAGAAGTGGAAAGGTCAGATCGATGGATGTC ATTTCTAGAAAGGCAAGCAGAGTCTTCTGAATTTGCCACAGACAGATTAGGTGTTGAGGAAGATGAGACAGTTTTGAGGGCTCAAGCCTTAGAGCACGAA GCTGATGCTGGCACGGAGAAAGCTGTTGATGGAGATGAATTAGGCACCCAGAAGCCTGGTTCTGATACTACAGCTGAAAATGATAGTCCGAAAGAGGAGA CTGAAGTTGATAGAGTCCTATTATGGACAGAGATAAGACCATCTCTTCGTACTATCGAGGATATGATGAGCATTCGTGTGAAGAAGAAAACTGCGTCAAT GAAAACTATTGGAAACAAGAAGGGCATGTTAAAGGATGAACAGATTGTTGGAGATGGGAAATCACTATCTCATACTGATGGTGCAAAATCACGAAAGGAA GGGTTTGTGGAAGACTCTGACGATGAGTTCTATGAAGTTGAGAGGTCAGATCCTAGTCCAGATACACCTACAGTTGATGGCACGAGTGCCTCTGCAAATG GTATTTCTGCTGACACTGGAACACTTGAGGCTTCATTTCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCGTGGAGGAGTGCCAATGGCACTGAGGGGAGA GCTTTGGCAAGCTTTTGTGGGTGTAAAAGCAAGGCGTCGGGAGAAGTATTATCAGAATCTGCTAGCTTCAGAGAATGATTCTGAAAGAAAAATGGATCAG CAAAGCATGCAGCAGTCAACTGACGATAATGGGAAAACCAATGCAAATCCTGTATTTGTGTCAGAAAAATGGAAAGGGCAGATTGAGAAGGATCTGCCAC GAACATTTCCTGGTCACCCTGCTCTGGACCAGGATGGTAGAAATGCTCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCTCAGTTGGTTATTG CCAGGCCATGAATTTTTTTGCTGGTTTATTGCTGCTTTTGATGCCTGAAGAAAATGCATTTTGGACCTTGATGGGAATTTTAGATGATTATTTTGATGGT TATTATTCTGAGGAAATGTTAGAATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCGGGAGAGGTTTCCCAAACTAGCCAATCATCTAGATTACC TGGGAGTGCAGGTAGCATGGGTTACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGGTCAGGCTTTACGTTTTATCTATTG AGTAGTGTATCTTAGTTTTAATCCATAAAGTATCCAATGTGAAATGAACATTTACTCTCTATACTTTGTGCCTCCTCATGACTAAAGTAATTATTTGGAC TTCAGTTCTTCGAGTGTGGGATGTGCTTCTTTTTGAAGGAAACCGAGTTATGCTATTTAAAACTGCAGTTGCTTTAATGGAGCTATATGGTCCAGCATTG GTAACAACTGCGGATGCTGGAGATGCAATTACTTCACTTCAGTCATTGGCTGGGTCCACTTTTGATAGCAGTCAGCTTGTATTGATGGCTTGCATGGGTT ACCAAAATATAAATGAAATTAGATTGCAAGAGCTTAGGAATAAACATCGGCCAGCTGTAATAGCTGCAGTTGAAGAAAGATCAGAAGTGCTTAAAGCTTG GAGGGATTCTAAGGGCCGGACATCAAAGAAATTTGGTTTTAAGCATGATCCTAAAATGGGGCAATCTGGGAGTTTATCTCGTGCAGAATCTGGTTCCACT AATAGGGAGGATATTTTGATTAGTCTGACTGGGGAGGGTGGGATAGATTCTGTTCCAGACCTTCAAGAGCAGGTTGTCTGGTTAAAGGATGAACTTTGCA GATTACAAGAGGAGAAAAGATCAGCTCTTCTCAGAGCGGAGGAGCTTGAAACAGCATTAATGGAGATGGTCAAGCAGGATAATAGGCGGCAACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188166; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445934
| Blastp | TBC1 domain family member 8B from Homo with 37.5% of identity |
|---|---|
| Blastx | TBC1 domain family member 8 from Mus with 36.15% of identity |
| Eggnog | TBC1 domain family member(COG5210) |
| Kegg | Link to kegg annotations (54885) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441616.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |