Id Trinity | TRINITY_DN51869_c1_g1_i31 |
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Name Transcript | Ll_transcript_445937 |
Sequence | GACGAAAAATATAAAGTTAATATATATTAAATTTAGTTTTACGAAGATTGAGTGATACACATTTTAAAAGAGAAGATGTGGTTCATGTAATACTAATGAT CGCGCATAGTGTGCATGTGCCATCATTTCTCTTAAAAATCTGAAGCTAGAAGCTAGTTACTACTACTAACTTTTTTCAAAAAACACATAACAAAACTAAA CTACACATAGATTCAGTTAAGAGAGAAAACAAAGGCGAACGAAACTGAAGAAGAACCAAATCTCTTCGATCATTTCTGATCCAATCCACAAATGAAGGCT ATTAACCCTCACATAACATTCGAACACAAGAGGGATGCATATGGATTTACTGTGCGACCTCAGCACCTGCAAAGATACCGCGAATATGCTAACATATATA AGGAAGAAGAAGAGGAAAGGTCAGATCGATGGAACTCATTTCTAGAACGGCAGGCTACGTCTTCTGAATTGGCAACAGAAAGATTAGGTGTGGAGGAAGA CGAGACAGTTTTGAGGGCTCAAGCTTCAGAGGAAGAAACTGATGATAACTTGAAAAAGGGTGTTGACGGAGATGAATTAAGCAGTGGGAAGCCTGGTTCT GATGGTACAGCTGAAAATGGTGGTCAGAAAGAGGAGGTACCGGCATCTGATGAGACTAAGGTTCATAGATCCCAATTATGGACAGACATAAGACCATCTC TTCGTACTATTGAGGATATGATGAGTACTCGTGTAAAGAAGAAAACTGCATCAGTAAACAATGTTGGAGATGGAAAATCACTGTCTCATATTGATGGTGC AAAATCACAAAAAGGAGCATACGAGGAAGACTCTGATGACGAGTTCTATGATGTTGAGAGGTCAGATCCTAGTCCAGATACGCCTCTAGTTGATAATACG AGTGTGTCTGCAAATGGTCTTGCTGCCGATGCTGCACCATCAGAAGCTCCATGCCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCATGGGGGAGTGCCAA TGGCACTGAGGGGAGAGCTTTGGCAAGCTTTTGTGGGTGTCAAAGCAAGACGCGTGGAGAAGTATTATCAGGATCTACTAGCTTCGGAGAATGAATCTGA AAGAAAAACGGATCAGCAAAGTATACAGTCAAAGGATGATAATGGGATACCCACGGCAGATCCTGTACCTGTGCCAGAAAAATGGAAAGGACAGATTGAG AAGGATCTGCCTCGAACATTTCCTGGTCATCCTGCTCTGGATGAGGATGGTAGAAATGCCCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCT CAGTTGGTTACTGCCAGGCCATGAACTTTTTTGCTGGCTTATTGCTGCTTTTGATGCCAGAAGAAAATGCCTTTTGGACCATGATGGGAATTATAGATGA CTATTTTGATGGCTATTATTCAGAGGAAATGTTAGAGTCTCAGGTGGATCAACTTGTTTTTGAGGAGTTGGTGCGGGAGAGGTTTCCCAAATTGGGTTTG TAAATTGTTTTCAGACATTTGTATATCTATGAATTTACCAAGTGAATTTTGTTTCTAGTTACATTCTCAGTTTTTAATTTCTTTTGCGAACTTCTTGTGC AGCCAATCATCTAGATTATCTAGGAGTGCAAGTAGCATGGGTTACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGGTCAG GCTTTACGTTTTATCTATTGAGTAGTGTATCTTAGTTTTAATCCATAAAGTATCCAATGTGAAATGAACATTTACTCTCTATACTTTGTGCCTCCTCATG ACTAAAGTAATTATTTGGACTTCAGTTCTTCGAGTGTGGGATGTGCTTCTTTTTGAAGGAACCCGAGTGATGCTATTTAGAACTGCAGTCGCTTTAATGG AGCTATATGGTCCAGCATTGGTAACAACTAAGGATGCTGGAGATGCAGTTACTTTACTCCAGTCATTGGCTGGCTCCACATTTGATAGCAGTCAGCTTGT ATTGACAGCTTGCATGGGTTTCCAAAATATAAATGAAGTTAGATTGCAAGAGCTGAGGAATAAACATCGGCCAGCTGTAATAGCTGCAGTTGAAGAAAGA TCAAAAGGGCTTAAAGCTTGGAGGGATTCTAAGGGCCTGGCGTCAAAGCTATTTGGTTTTCAACATGATCCTAAAATGGAGCAATCGGGGAGCTTATCTC GTTCAGAATCCGGTTCCACTAATGCAGAGGAAATTCTGATTAGTCTGACTGGGGAGGGTGAGATTGATTCTGTTCCAGATCTTCAAGAGCAGGTTGTCTG GCTGAAGGTTGAACTTTGCAGATTACTAGAGGAGAAAAGATCGGCTATTCTCAGAGCGGAGGAACTTGAAACAGCATTAATGGAGATGGTCAAGCAGGAT AATAGGCGGCAACT BLAST |
Tissue | pods |
Gene name | LI_gene_188166; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445937
Blastp | TBC1 domain family member 8B from Mus with 37.71% of identity |
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Blastx | TBC1 domain family member 8B from Mus with 37.71% of identity |
Eggnog | TBC1 domain family member(COG5210) |
Kegg | Link to kegg annotations (245638) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452541.1) |
Pfam | Rab-GTPase-TBC domain (PF00566.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |