| Id Trinity | TRINITY_DN51871_c5_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_445866 |
| Sequence | CACATTTCACCAACTCAAGAATTTCCTGTACTTGCTATCACTCTCTTTTCAAAACCCTATTTTTATGAATTCTAACCCATTTATTTAACATAATTCCCAT TTATAACAACATACTTTATCTCTTCATCCCCACCTATTTCTAAAGCAAATCTTGAAAGACATTCTATGGAGAAGAGAACAAGTATGAAAGAGTCACAGAA ACTTAACCAAACATTTTTCAGAAAACACCTTAATAAAGTTTACCCTATTGGGCTTCACAAAAGAAGCTCTTCATCTTCATCCTTATCTTCATTATCAGAA AACACAGATGATTCTTCTCTAACAGATTCTTTGACTCTACTGGATGAAAATGTTTCATTAGGGTTGCGTTTGATTTTGCCACGTGAAAGAGGAGAACCTG CACTTGTTAATGCAGCTACTGAGGCTGGAGAATTGAAAAGATGCAACTGGATCACAAAGAACTGTGATAAGGCTTACATAGAATTTCACGATGAATGTTG GGGAACTCCAGCTTATGATGACAAAAAATTGTTCGAGCTGCTTGCAATGTCTGGATTGCTGATAGATTACAATTGGACAGAAATTCTAAAAAGAAAACAA ATTCTTAGGTAACTCTGTGTTTGTAGAAAATTGTTACACGTACCCATGTTGTTTGGTTTAATCTTTAATGTAATAACATTAATACGTCTATATAATGTTA TGTTGACACAGAGAAGTTTTTGCTGGATTTGATCCTAATACTGTTGCCAAAATGGAGGAGAAGGAAATCATGGAGATAGCATCAAACAAAGCACTTTCAT TAGCCGATTGCAGAGTTAGATGCATAGTAGACAATGCCAAATGCATAATGAAGGCAAGTACAGAATGGTGTGATTTCCATGACTTCTAACTTCATAGTGG TAATGGTTTTAAATAGTAGACTGCAATTGTAGTCACGGTATTGCAATTTTAGAAGATTATGCAATGATAAGATGATCAAAATTATCAATTATGGCTGCAT CAATCATAATTTTCAACAACAACAATAGTCAAATCTTTATCTCACTAGATTGAATCGGCTACATGAAGTAAAAGACATCATAACTGTAATTTTTAGCAAT TGTGATAAATGAGGCTCAATCCTAATACATTATTATATTTGGTGACCCTTTTCATGTTGAATACTAGGATGACAAGATTGAACACAACATACCCACAACC TCAAGCCTAATCACAGTTTAAAACCATTTTGATAGTTAATTACTCAGTGCTTGATCTTTTTTGTCCACAGATTGTGAGGGAATATGGATCATTCAGTAGC TATATATGGGGTTATGTAAATCACAAACCAGTGATTAACAGATACAAGTACCCAAGAAATGTTCCACTAAGGACTCCAAAAGCAGAAGCCATAAGCAAGG ACTTGATAAAGCGTGGGTTTAGATTTTTGGGTCCAATAATAGTGTACTCTTTTATGCAAGCTGCAGGGTTGACCATTGATCATGTTGTTGATTGTTACAG GCACAGTGAATGTGTAAGCCTAGCAGAAAGACCTTGGAGACATATCTAACATTAACTCACTTGCATATTTTTTAATTGAATTTTGTTTGAATGTACCCTA TATGGCCCCTCTATTCATTTTTTGTCTCAATCATAGTCATGCGGTTGCTACTATCAATAATTTAAAAAGTAGCCTATCAACTTGAGTGATTCTCTAGTCA AGCCTTGAGGGTTTATTTGTATTGATGCTAAATGTTATTAACTACATATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188188; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445866
| Blastp | DNA-3-methyladenine glycosylase 1 from Escherichia with 37.29% of identity |
|---|---|
| Blastx | Probable GMP synthase [glutamine-hydrolyzing] from Helicobacter with 40.48% of identity |
| Eggnog | DNA-3-methyladenine glycosylase activity(COG2818) |
| Kegg | Link to kegg annotations (JW3518) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456876.1) |
| Pfam | Methyladenine glycosylase (PF03352.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |