Ll_transcript_447279

• Id Trinity: TRINITY_DN51872_c0_g1_i17
• Name Transcript: Ll_transcript_447279
• Sequence: TAAATGGAGACGGTTTCTTTCTAATAGTGTGCAGAGTTCTATTTAAGTCCCTCTTTCCACTCTTGCATTTTTCCCTCACGCTATATTTACGTCATTTTCT TCTCATAACTTCTCTCTCTTTTTTCTTCAAACCCTCACTTGCTTACAATGTCTCGTCGCGGTGGTGGCAGTTACCAACCTGATCAACGCCGTGATCGCCC TTCTCCGGCGCAACCAACTCCCGCTGAAGCTTCCGGAAGAGGCCGTGGTCGTGGACGTGGCGGTGCTCGTGGCATTTCTGGTCAAGGCCGTGGAGCGACT CAAGTTCCGTCGCCGGTGATAGGTTCTCCTTCCATGGCGCCTGTGTTCGGTTCTCAACCTACGGCGCCGGTGATTGGTTCTTCTTCGCAAGCGCATGTTG TTTCCAGTGCTCCTAGTTCTGTGGCACCGCCTCCAGCCGCGGCTCCGTCACCGGCTTCGACTTCAGTAGAAGCTCTGAGTTCTGAGGTTGCGGAGACGCT TACATTGCAACCGCCGGCGCCGTCGTCATCGAAGGCGGTTAGGTTTCCTAACCGGCCAAGTTATGGGTCACGGGGAAAGAAAATAAGAATCCGTGCGAAT CATTTTCTCGTTCAAGTTGCAGACCGTGATTTGCACCATTATGATGTCAGTTACTCAGGCTTATGAAATTTCACTTCAATAAAGAAACAAGAACATATCT ATTCTTATCATTTACTAAATTATTTTATCACTTACTTTTTTGCAACGTGGTTTTTTGAAAGTAAAGACTAAAGAGTAAAGACGATGCATATAAATCATTT GATTTTATGTTCTTAGGTTGCAATAAATCCCGAGGTTACTTCGAAGAAGGTTAATAGAGATATCATGAAACAATTGGTTGAAACATATCAAGATGCATAT CTTGGGAAGCTTACACCTGCTTACGATGGCCGGAAGAATCTTTACACCGGAGGCGCATTACCGTTCTCATCAAAAGAGTTTGTTGTTAAGTTGGTTGATC AGGATAAACAACCGCATTCTTCTGAAGGTTCAGCAAGTAAAAAACGTGAGCGTGAGTTTAAGGTGACCATCCGATTTGCTTCGAAGCCGGACCTTCATCA TCTGCAGCAATTCCTCCGACGTCAACAGTTGGACTCTCCACAAGAGACTATACAGGCTCTCGACGTTGTTTTGCGGGCAACACCGTCTATGAAGTATAAT GTTGTGGGGAGTTCATTTTTTTCACCGGATTTGGGGATAAGTGGTTCACGTGGCAGTGGGGTTGGCCCACTTGGCAGTGGTACAGAGTACTGGAGAGGGT TTTATCAAAGCCTTCGCCCAACACAGATGGGGCTATCTCTGAATGTTGATGTCTCAGCCAGGGCATTCTATGAACCGATTCCTGTGCCTGATTTTCTTGT TAAACATTTTAAATTCAATTTTTCAAGGCCACTGTCTGATCAAGATCGTGTTAAGGTTAAGAAAGCTTTGAGAGGAGTTAAGGTAGTGCTTGTGGGAATT GGGAATACTAGAAGTTACAAAGTTGTTGGTGTCTCTAAAGAGCCCTTGCGGGACTTGACATTTGTCCTGGATGACAAAAGGACACAAAAATCAGTTGTTC AATATTTTTCTGAGAAATATGAAGTTAATTTGAAGCATACATATCTGCCTGCTGTCCAAGCTGGAAGTGACACAAAACCAGTCTACCTACCGATGGAGCT TTGCCAGATTGTCTCTGGACAGAGGTACACCAAGAGATTAAATGAGGACCAAGTCACTGCTCTTTTAAGGGCAACTTGTCAGCGACCTCATGAAAGGGAA AATTACATTAAACAGATTTTGAGGCAGAATAATTTCAACACAGACAAGCTTGTGCATGACTTTGGAATTCAAATAAATGAAGAACTAGCGACAGTTGAAG CCCGGGTGTTGCCTCCCCCAATGCTGTTATATCACCAAACAGGGAAAGAATCAAGTGTTGACCCCCGGATGGGGCAATGGAATATGATAAACAAGAAAAT GATTGATGGTGGCAAGGTGCTATATTGGGGTTGTGTCAACTTTTCAACAAGAGTTAACAGAGACTTGCCATCAACTTTTTGTTTTGAGCTAGTCAATATG TGTACTAGCAAAGGAATGGTTTTTGCTCCTGAGCCTTTGGTACCCATCATTTCTGCTCAGCCTTCTCAAATAGATAGAGTTCTTGTGGATGTGCATAAGC AATCTGTGAATAAGCTTGCAAACATGAAGGTGGAGGGAAGACTTCAGTTGTTGATAATAATTCTGCCTGATGTTAAGGGGTCCTATGGAAGAATAAAGCG TATTTGCGAAACTGAATTAGGAATAGTCTCTCAATGCTGTCAGCCTAGGCAAGCTTCAAAATTGAGTAAACAATACCTTGAAAATCTTTCCCTCAAGATA AATGTCAAGGCTGGTGGTCGAAATACAGTTTTGAATGATGCAATTCAAAGGACGATTCCTCATGTGAGCGATCTACCAACATTAATCTTGGGTGCAGATG TGACACATCCACAACCAGGAGAAGATTCCAGTCCTTCTATTGCTGCGGTTGTGGGATCCATAGATTGGCCTTGGGTCACAAGATACAGAGGAATTGTTTC TGCCCAATCTCATCGCGAAGAAATTATTCAGGATCTTTATAATTCTTATCAGGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCAGAGAGTTACTT AGAGCTTTCTATCAGTCAGCCAGGGTTAAGCCTGCCAGGATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTTACTTCATGAAA TGGATGCAATTAGAAGGGCTTGTCTCTCATTAGAAGAGGGATATCTACCCCGGGTTACCTTTGTGGTGGTGCAGAAGAGACACCACACTCGGTTTTTTCC TGTTGACCGTTCTCAGATGGATAAAAGTGGAAATATTATGCCAGGGACTGTAGTGGACACCACTATCTGTCACCCTAGGGAACATGATTTTTACCTTAAT AGTCATGCCGGAATTCAAGGAACAAGTCGACCGACACATTATCATGTTTTGTATGATGAAAACAATTTCACTGCTGATGAGCTGCAAAGTCTTACAAATA ACTTATGTTATACGTATGCAAGGTGCACTCGATCTGTTTCAATAGTCCCTCCTGCTTATTATGCGCACCTGGCTGCTTTCCGAGCCCGCTATTATATTGA AGGGGAAGCATCAGAAATAGGTTCTACAAGTGGTGGAAGTGGAAGCAGGGGCACTAATGTGGTGGTGACTATGCCGTCTGTCATGGATAATGTGAAGGAA GTGATGTTTTTCTGCTGAAATGAAGATATATTTTTTTCGTACAATGAAATGGAGATTTTGTTTTGGTACAATGAAATGATTTTGGGTTTTGGCGTAAAGG TATATGTACTATGTAGGCTCACACAAGTCACAACTCCCTCTTGGGCTTTGTAGAGAGCTTTTTTTGTTTTTTGGTCAAAAATATTTTCATCAGATCTTAA CATGGCTTTAGTTTATGGCATTAACACTTATATGTTATGTTCTGTATGAGTGTGCTGTCTACATAAATGATTACTTTTATATGGATGAAGTATTTGTATT AAATAGTATATGCAATATCTATCTCACCTTTACTGAGAATTTGTGTTTTCAACTTAAAAA
• Tissue: pods
• Gene name: LI_gene_188197;
• Additional information: details;

Expression of Ll_transcript_447279

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 1.9
• PS2: 1.3
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447279

• Blastp: Protein argonaute 5 from Arabidopsis with 63.75% of identity
• Blastx: Protein argonaute 5 from Arabidopsis with 63.84% of identity
• Eggnog: eukaryotic translation initiation factor 2c(ENOG410XP07)
• Kegg: Link to kegg annotations (AT2G27880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448805.1)
• Pfam: N-terminal domain of argonaute (PF16486.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;