Id Trinity | TRINITY_DN51872_c0_g1_i22 |
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Name Transcript | Ll_transcript_447284 |
Sequence | TAAATGGAGACGGTTTCTTTCTAATAGTGTGCAGAGTTCTATTTAAGTCCCTCTTTCCACTCTTGCATTTTTCCCTCACGCTATATTTACGTCATTTTCT TCTCATAACTTCTCTCTCTTTTTTCTTCAAACCCTCACTTGCTTACAATGTCTCGTCGCGGTGGTGGCAGTTACCAACCTGATCAACGCCGTGATCGCCC TTCTCCGGCGCAACCAACTCCCGCTGAAGCTTCCGGAAGAGGCCGTGGTCGTGGACGTGGCGGTGCTCGTGGCATTTCTGGTCAAGGCCGTGGAGCGACT CAAGTTCCGTCGCCGGTGATAGGTTCTCCTTCCATGGCGCCTGTGTTCGGTTCTCAACCTACGGCGCCGGTGATTGGTTCTTCTTCGCAAGCGCATGTTG TTTCCAGTGCTCCTAGTTCTGTGGCACCGCCTCCAGCCGCGGCTCCGTCACCGGCTTCGACTTCAGTAGAAGCTCTGAGTTCTGAGGTTGCGGAGACGCT TACATTGCAACCGCCGGCGCCGTCGTCATCGAAGGCGGTTAGGTTTCCTAACCGGCCAAGTTATGGGTCACGGGGAAAGAAAATAAGAATCCGTGCGAAT CATTTTCTCGTTCAAGTTGCAGACCGTGATTTGCACCATTATGATGTTGCAATAAATCCCGAGGTTACTTCGAAGAAGGTTAATAGAGATATCATGAAAC AATTGGTTGAAACATATCAAGATGCATATCTTGGGAAGCTTACACCTGCTTACGATGGCCGGAAGAATCTTTACACCGGAGGCGCATTACCGTTCTCATC AAAAGAGTTTGTTGTTAAGTTGGTTGATCAGGATAAACAACCGCATTCTTCTGAAGGTTCAGCAAGTAAAAAACGTGAGCGTGAGTTTAAGGTGACCATC CGATTTGCTTCGAAGCCGGACCTTCATCATCTGCAGCAATTCCTCCGACGTCAACAGTTGGACTCTCCACAAGAGACTATACAGGCTCTCGACGTTGTTT TGCGGGCAACACCGTCTATGAAGTATAATGTTGTGGGGAGTTCATTTTTTTCACCGGATTTGGGGATAAGTGGTTCACGTGGCAGTGGGGTTGGCCCACT TGGCAGTGGTACAGAGTACTGGAGAGGGTTTTATCAAAGCCTTCGCCCAACACAGATGGGGCTATCTCTGAATGTTGATGTCTCAGCCAGGGCATTCTAT GAACCGATTCCTGTGCCTGATTTTCTTGTTAAACATTTTAAATTCAATTTTTCAAGGCCACTGTCTGATCAAGATCGTGTTAAGGTTAAGAAAGCTTTGA GAGGAGTTAAGGTAGTGCTTGTGGGAATTGGGAATACTAGAAGTTACAAAGTTGTTGGTGTCTCTAAAGAGCCCTTGCGGGACTTGACATTTGTCCTGGA TGACAAAAGGACACAAAAATCAGTTGTTCAATATTTTTCTGAGAAATATGAAGTTAATTTGAAGCATACATATCTGCCTGCTGTCCAAGCTGGAAGTGAC ACAAAACCAGTCTACCTACCGATGGAGCTTTGCCAGATTGTCTCTGGACAGAGGTACACCAAGAGATTAAATGAGGACCAAGTCACTGCTCTTTTAAGGG CAACTTGTCAGCGACCTCATGAAAGGGAAAATTACATTAAACAGATTTTGAGGCAGAATAATTTCAACACAGACAAGCTTGTGCATGACTTTGGAATTCA AATAAATGAAGAACTAGCGACAGTTGAAGCCCGGGTGTTGCCTCCCCCAATGCTGTTATATCACCAAACAGGGAAAGAATCAAGTGTTGACCCCCGGATG GGGCAATGGAATATGATAAACAAGAAAATGATTGATGGTGGCAAGGTGCTATATTGGGGTTGTGTCAACTTTTCAACAAGAGTTAACAGAGACTTGCCAT CAACTTTTTGTTTTGAGCTAGTCAATATGTGTACTAGCAAAGGGATGGTATGATACCATTTTTATGCCATTTCATCGAATCATTTCCTTCCAATGGGATG CCTTTTACCTGTATGTATTTTTATGGCAGGTTTTCGCTCGAGAGCCTTTGGTACCAATCATTTCAGCTCAACCTTCTCAAATAGAGAAGGCTCTTGTGGA TGTACATAAGCAGTCTGTGAGTAAGCTTGCCAGCATGAAGCAGGAGGGAAAATTAAAGCTGTTGATAATTATTTTGCCTGATGTCAAGGGGTCCTATGGA ACAATAAAGCGTATTTGTGAAACCGAATTGGGAATAGTCTCTCAGTGCTGTCAGCCTAGGCAAGCTTCAAAATTGAGTAAACAGTACCTTGAAAATGTTT CCCTCAAGATAAATGTCAAGGTCGGTGGTCGAAACACAGTTTTGAATGATGCAATTCAGAGGAAAATTCCTCATGTGAGCGATCTGCCAACATTAGTTTT GGGTGCAGATGTGACACATCCACAACCAGGAGAAGATTCCAGCCCTTCTATAGCTGCAGTTGTTGGATCAATGGACTGGCCTTGGGTCACAACATACAGG GGAATTGTTTCTGCTCAATCTCACCGCGAAGAAATTATTGAGGATCTCTATAAATCTTATCAAGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCA GAGAGTCACTTAGAGCTTTCTACCAAACAGCAAGGGTTAAGCCTGCCAGAATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTT GCTTCACGAAATGGATGCAATTAGAAAGGCTTGTGTCTCGTTAGAAGAGGGATATCTACCCCCAGTTACCTTTGTGGTGGTACAGAAGAGACACCACACT CGATTTTTCCCTGTTGATCGGTCTCAGACGGATAAAAGTGGAAACATTATGCCAGGTTTCACGCTTATTACCTGTAGTCAGATATATACTACATATAATA TGCTGGATTGGCCTGTCAATATTACTTCCATGTCAAACTACTGCTGTTAACAATGTCTTTTCATCTTTTTATTTATTTTACGGAGTTTATACTTCTAATT TTTCAGGGACTGTTGTGGACACCTCTATCTGTCACCCTCGGGAACATGATTTTTATCTTAATAGCCATGCTGGGATTCAAGTAAGATTTGCAAGTGCAAC ATTTTGCCTGGGCTACTTTTTGCTGCTCCGTTGGCATTTGAAAATATTTAATCTGATTGCATGCAGGGAACAAGTCGACCGACACATTATCATGTTTTGT ATGATGAGAACAATTTCACTGCGGATGAGCTGCAAAGTTTTACAAATAATTTATGTTATACGTA BLAST |
Tissue | pods |
Gene name | LI_gene_188197; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447284
Blastp | Protein argonaute 5 from Arabidopsis with 53.23% of identity |
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Blastx | Protein argonaute 5 from Arabidopsis with 58.86% of identity |
Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
Kegg | Link to kegg annotations (AT2G27880) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448805.1) |
Pfam | N-terminal domain of argonaute (PF16486.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |