| Id Trinity | TRINITY_DN51872_c0_g1_i27 |
|---|---|
| Name Transcript | Ll_transcript_447289 |
| Sequence | TAAATGGAGACGGTTTCTTTCTAATAGTGTGCAGAGTTCTATTTAAGTCCCTCTTTCCACTCTTGCATTTTTCCCTCACGCTATATTTACGTCATTTTCT TCTCATAACTTCTCTCTCTTTTTTCTTCAAACCCTCACTTGCTTACAATGTCTCGTCGCGGTGGTGGCAGTTACCAACCTGATCAACGCCGTGATCGCCC TTCTCCGGCGCAACCAACTCCCGCTGAAGCTTCCGGAAGAGGCCGTGGTCGTGGACGTGGCGGTGCTCGTGGCATTTCTGGTCAAGGCCGTGGAGCGACT CAAGTTCCGTCGCCGGTGATAGGTTCTCCTTCCATGGCGCCTGTGTTCGGTTCTCAACCTACGGCGCCGGTGATTGGTTCTTCTTCGCAAGCGCATGTTG TTTCCAGTGCTCCTAGTTCTGTGGCACCGCCTCCAGCCGCGGCTCCGTCACCGGCTTCGACTTCAGTAGAAGCTCTGAGTTCTGAGGTTGCGGAGACGCT TACATTGCAACCGCCGGCGCCGTCGTCATCGAAGGCGGTTAGGTTTCCTAACCGGCCAAGTTATGGGTCACGGGGAAAGAAAATAAGAATCCGTGCGAAT CATTTTCTCGTTCAAGTTGCAGACCGTGATTTGCACCATTATGATGTTGCAATAAATCCCGAGGTTACTTCGAAGAAGGTTAATAGAGATATCATGAAAC AATTGGTTGAAACATATCAAGATGCATATCTTGGGAAGCTTACACCTGCTTACGATGGCCGGAAGAATCTTTACACCGGAGGCGCATTACCGTTCTCATC AAAAGAGTTTGTTGTTAAGTTGGTTGATCAGGATAAACAACCGCATTCTTCTGAAGGTTCAGCAAGTAAAAAACGTGAGCGTGAGTTTAAGGTGACCATC CGATTTGCTTCGAAGCCGGACCTTCATCATCTGCAGCAATTCCTCCGACGTCAACAGTTGGACTCTCCACAAGAGACTATACAGGCTCTCGACGTTGTTT TGCGGGCAACACCGTCTATGAAGTATAATGTTGTGGGGAGTTCATTTTTTTCACCGGATTTGGGGATAAGTGGTTCACGTGGCAGTGGGGTTGGCCCACT TGGCAGTGGTACAGAGTACTGGAGAGGGTTTTATCAAAGCCTTCGCCCAACACAGATGGGGCTATCTCTGAATGTTGATGTCTCAGCCAGGGCATTCTAT GAACCGATTCCTGTGCCTGATTTTCTTGTTAAACATTTTAAATTCAATTTTTCAAGGCCACTGTCTGATCAAGATCGTGTTAAGGTTAAGAAAGCTTTGA GAGGAGTTAAGGTAGTGCTTGTGGGAATTGGGAATACTAGAAGTTACAAAGTTGTTGGTGTCTCTAAAGAGCCCTTGCGGGACTTGACGTATACTTCACT TTTTTCTTTCAGTTTTATTTTGGTTATTGTCTTCGGGTCAAGATAAACTGGATATTTCCACTGTTTGACGTCTTCCCTCTACTTTTTGAATCCAACTCTT GATTTTGTAATTTGATACCTCTTTAGATTTGTCCTGGATGACAAAAGGACACAAAAATCAGTTGTTCAATATTTTTCTGAGAAATATGAAGTTAATTTGA AGCATACATATCTGCCTGCTGTCCAAGCTGGAAGTGACACAAAACCAGTCTACCTACCGATGGAGCTTTGCCAGATTGTCTCTGGACAGAGGTACACCAA GAGATTAAATGAGGACCAAGTCACTGCTCTTTTAAGGGCAACTTGTCAGCGACCTCATGAAAGGGAAAATTACATTAAACAGATTTTGAGGCAGAATAAT TTCAACACAGACAAGCTTGTGCATGACTTTGGAATTCAAATAAATGAAGAACTAGCGACAGTTGAAGCCCGGGTGTTGCCTCCCCCAATGCTGTTATATC ACCAAACAGGGAAAGAATCAAGTGTTGACCCCCGGATGGGGCAATGGAATATGATAAACAAGAAAATGATTGATGGTGGCAAGGTGCTATATTGGGGTTG TGTCAACTTTTCAACAAGAGTTAACAGAGACTTGCCATCAACTTTTTGTTTTGAGCTAGTCAATATGTGTACTAGCAAAGGGATGGTTTTCGCTCGAGAG CCTTTGGTACCAATCATTTCAGCTCAACCTTCTCAAATAGAGAAGGCTCTTGTGGATGTACATAAGCAGTCTGTGAGTAAGCTTGCCAGCATGAAGCAGG AGGGAAAATTAAAGCTGTTGATAATTATTTTGCCTGATGTCAAGGGGTCCTATGGAACAATAAAGCGTATTTGTGAAACCGAATTGGGAATAGTCTCTCA GTGCTGTCAGCCTAGGCAAGCTTCAAAATTGAGTAAACAGTACCTTGAAAATGTTTCCCTCAAGATAAATGTCAAGGTCGGTGGTCGAAACACAGTTTTG AATGATGCAATTCAGAGGAAAATTCCTCATGTGAGCGATCTGCCAACATTAGTTTTGGGTGCAGATGTGACACATCCACAACCAGGAGAAGATTCCAGCC CTTCTATAGCTGCAGTTGTTGGATCAATGGACTGGCCTTGGGTCACAACATACAGGGGAATTGTTTCTGCTCAATCTCACCGCGAAGAAATTATTGAGGA TCTCTATAAATCTTATCAAGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCAGAGAGTCACTTAGAGCTTTCTACCAAACAGCAAGGGTTAAGCCT GCCAGAATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTTGCTTCACGAAATGGATGCAATTAGAAAGGCTTGTGTCTCGTTAG AAGAGGGATATCTACCCCCAGTTACCTTTGTGGTGGTACAGAAGAGACACCACACTCGATTTTTCCCTGTTGATCGGTCTCAGACGGATAAAAGTGGAAA CATTATGCCAGGGACTGTTGTGGACACCTCTATCTGTCACCCTCGGGAACATGATTTTTATCTTAATAGCCATGCTGGGATTCAAGGAACAAGTCGACCA ACACATTATCATGTTTTGTATGATGAGAACAATTTCACTGCGGATGAGCTGCAAAGTTTTACAAATAATTTATGTTATACGTATGCAAGATGCACTCGAT CCGTTTCAATAGTCCCTCCGGCTTATTATGCACACCTGACTGCTTTCCGAGCTCGCTACTACATCGAAGGGGAATCATCAGATATAGGTTCTACAAGTGG TGGAAGTGGAAGCAGGGCTACTAACGTGATGGTTACTATGCCCTCAGTTATGGACAGCGTGAAAGAAGTGATGTTTTTCTGTTAAAATGAAGATATATCT GCATACTAGTGATTTTGGGTTTTGACCAAAAACATTTACTCACCCAACTTTCTCTCTCTCTCTGTCGGACTTTGTAGAGAGCTTTTTTTGATTCTTGGTT TTGGTGGATTATAAATATGGAATTTTCATAAGATCTTATTAATTTGTGGTTATTATATTTATATGAGTGTGGTTTTGTCTATCTTTATCTGGTTGAAGTG TTGGTGGGTTTATGAAGATTTAGAATTTGGGTATTTGTATATCCGTATATGTATTGAGGACTCTGATTTTGGATAGTGGGAAGAGGATTAGGAAGAAATT TTATCAACGTTCCACCATCGAAGCCAGAGGAGAAGATCAGAACGCCCAAAGGCATAATAATAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188197; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447289
| Blastp | Protein argonaute 5 from Arabidopsis with 68.26% of identity |
|---|---|
| Blastx | Protein argonaute 5 from Arabidopsis with 60.74% of identity |
| Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
| Kegg | Link to kegg annotations (AT2G27880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448805.1) |
| Pfam | Argonaute linker 2 domain (PF16488.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |