Ll_transcript_447271

• Id Trinity: TRINITY_DN51872_c0_g1_i9
• Name Transcript: Ll_transcript_447271
• Sequence: AAGATTTTGGTGGGGGAAAGAGAGTTAGTGGGAGTAGGTGGATTCAATATTTAATATATATCTACTGTTAGTAAATCATTTATCATTGATATGTTAATTA CCGTTGAGTCTTAAACAAAAGTAATACAAATTGGATGATAGGCTGATATTATAAAAACTTTACACCGATAGTATATAAATTTTAAACTCTTTTAAAAAAA TATATCACTATCTATAATTAGTCTAAAAAATATTTAATCATTAACTTTTTTAACTTATATAAATTTTTTCAACAAATAAGAAACAATGATATATGAAATG TGATACATGATTCCTTCCTTATTAAACAGCTTTATTTCCTAAAAAAATAATATCCAAATTTCCGTGTCTTCTTCCGTTACAAGAAGACGGTTTCTTTTGA CAGTGTTAGAAGTTCTATTTAAGCCTCTTACATTCTCTACTCACGCCATTCTATTTCCAGACTCATTCTCTGTCGACTTCTTCTCTTTTCTTCAAACCCT CACTCATTCACTCACAATGTCTCGCCGCGGTGGCAGTTACCAATCTGACCAACGCCGCGATCGTCCCTCTCCGTCGCAACCAACTCCTAGCGAAGTCGCA GGAAGAGGCCGAGGTCGTGGCCGTGGCAGTTCTGGTCAAGGCCGTGGAGCGACTCATGCTCCGCCACCGGTCACCGGTTCTCCATCTCAGTCGCCTGTGT TTGGTTCTCAACCTCCGGTGATCGGTTCTTCTTCACATGCGAATGTTGCTCCTGCCTCTAGTTCTGTGACGCTTCCTCCTGCCGCATCTGTTGAGGTAGC TCCGCCTCCGCCAACGGCTTCGACTTCAGTGGAAGCCCTGACATCGGAGGTTACGGAGCGGCTGACATTGAACGCTCCGGCACCGGCGCCGGCGCCGTCA TCGTCGAAGGCTATTAGGTTTCCTAACCGCCCAAACTACGGGACACTGGGAAAGAAAATCAGAATTCGGGCGAATCATTTTCTCGTACAAGTTGCTGACC GTGATTTGCACCATTACGATGTTGCAATAAATCCTGAAGTTACTTCGAAGAAGGTTAATAGAGATATCATAAAACAATTAGTTGAAACATATCAAGAGAC ACATTTAGGTAAGCTTACACCTGCTTACGATGGGCGTAAGAACCTTTACACTGGAGGTGCATTACCATTCACATCAAGAGATTTTGTTGTTAAGTTGGTT GATCAGGATAATCAAGCATCTTCTGAAGGTTCAGCAAGCAAAAAACGTGAACGTGAGTTTAAGGTCACCATCCGATTTGCCTCAAAGCCTGACCTTCATC ATCTTCAGCAATTCCTTAGGCGCCAACAGCTGGACTCTCCACAAGAGACTATACAAGCTCTTGATGTTGTTTTGAGGGCTACACCTTCAATGAAGTATAA TGTTGTGGGGAGTTCATTTTTTTCACCGGATTTGGGGATAAGTGGTTTACCTGGCAGTGGTATTGGTCCACTTGGCAGTGGTACAGAGTACTGGCGAGGA TACTATCAAAGCCTTCGCCCAACACAGATGGGACTATCCCTGAATGTTGATGTTTCGGCAAGGGCATTCTATGAACCAATTCTTGTGTCTGACTTTCTTG TCAAACATTTTAAATTCAATTTTTCAAGACCACTGTCCAATCAAGACCGTATTAAGGTTAAGAAAGCACTGAGAGGAGTTAAGGTAGAGCTTATAGGCAT TGGGGCTTCTAGAAGTTACAAAGTTTCTGGTGTCTCAAAAGAGCCCCTGCGCGAGTTAACATTTACCTTGGATGATAAAAAAACCAAAAAAACAGTTGTC CAGTATTTCTATGAGAAATATGATGTTCAGTTGAAGTATACAAATCTTCCTGCTGTCCAAGCTGGAAGTGACACAAAACCAGCCTACCTACCAATGGAGC TTTGTCAGATTGCTGCTGGACAGAGGTACACCAAGAGATTAAATGAGGACCAAGTCACTGCTCTTTTAAGAGCAACCTGTCAGCGTCCCCATGAAAGGGA AAATTACATTAAACAGATTGTGAGGAAGAACAATTTCAACACAGACAAGCTTGTGCATGACTTTGGAATTCAAATAAATGAAGAGCTAGCGACGGTTGAG GCTCGTGTCTTGCCTCCACCAAGGCTTTTATATCATAAAACAGGGAAAGAATCAAGTGTTGATCCCTGGATGGGGCAGTGGAATATGATAAACAAGAAAA TGATTGATGGTGGTAAGGTGCTACATTGGGCTTGTGTAAACTTTTCAACAAGAGTTAACAGAGACTTGCCATCAACTTTTTGTTTTGAGCTAGTCAATAT GTGTACTAGCAAAGGGATGGTTTTCGCTCGAGAGCCTTTGGTACCAATCATTTCAGCTCAACCTTCTCAAATAGAGAAGGCTCTTGTGGATGTACATAAG CAGTCTGTGAGTAAGCTTGCCAGCATGAAGCAGGAGGGAAAATTAAAGCTGTTGATAATTATTTTGCCTGATGTCAAGGGGTCCTATGGAACAATAAAGC GTATTTGTGAAACCGAATTGGGAATAGTCTCTCAGTGCTGTCAGCCTAGGCAAGCTTCAAAATTGAGTAAACAGTACCTTGAAAATGTTTCCCTCAAGAT AAATGTCAAGGTCGGTGGTCGAAACACAGTTTTGAATGATGCAATTCAGAGGAAAATTCCTCATGTGAGCGATCTGCCAACATTAGTTTTGGGTGCAGAT GTGACACATCCACAACCAGGAGAAGATTCCAGCCCTTCTATAGCTGCAGTTGTTGGATCAATGGACTGGCCTTGGGTCACAACATACAGGGGAATTGTTT CTGCTCAATCTCACCGCGAAGAAATTATTGAGGATCTCTATAAATCTTATCAAGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCAGAGAGTCACT TAGAGCTTTCTACCAAACAGCAAGGGTTAAGCCTGCCAGAATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTTGCTTCACGAA ATGGATGCAATTAGAAAGGCTTGTGTCTCGTTAGAAGAGGGATATCTACCCCCAGTTACCTTTGTGGTGGTACAGAAGAGACACCACACTCGATTTTTCC CTGTTGATCGGTCTCAGACGGATAAAAGTGGAAACATTATGCCAGGGACTGTTGTGGACACCTCTATCTGTCACCCTCGGGAACATGATTTTTATCTTAA TAGCCATGCTGGGATTCAAGGAACAAGTCGACCAACACATTATCATGTTTTGTATGATGAGAACAATTTCACTGCGGATGAGCTGCAAAGTTTTACAAAT AATTTATGTTATACGTATGCAAGATGCACTCGATCCGTTTCAATAGTCCCTCCGGCTTATTATGCACACCTGACTGCTTTCCGAGCTCGCTACTACATCG AAGGGGAATCATCAGATATAGGTTCTACAAGTGGTGGAAGTGGAAGCAGGGCTACTAACGTGATGGTTACTATGCCCTCAGTTATGGACAGCGTGAAAGA AGTGATGTTTTTCTGTTAAAATGAAGATATATCTGCATACTAGTGATTTTGGGTTTTGACCAAAAACATTTACTCACCCAACTTTCTCTCTCTCTCTGTC GGACTTTGTAGAGAGCTTTTTTTGATTCTTGGTTTTGGTGGATTATAAATATGGAATTTTCATAAGATCTTATTAATTTGTGGTTATTATATTTATATGA GTGTGGTTTTGTCTATCTTTATCTGGTTGAAGTGTTGGTGGGTTTATGAAGATTTAGAATTTGGGTATTTGTATATCCGTATATGTATTGAGGACTCTGA TTTTGGATAGTGGGAAGAGGATTAGGAAGAAATTTTATCAACGTTCCACCATCGAAGCCAGAGGAGAAGATCAGAACGCCCAAAGGCATAATAATAAAT
• Tissue: pods
• Gene name: LI_gene_188197;
• Additional information: details;

Expression of Ll_transcript_447271

FPKM

• PAB: 1
• PNAB: 8.4
• PS1: 19.7
• PS2: 9.1
• PS3: 15.2
• PW1: 14.1
• PW2: 2.7
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447271

• Blastp: Protein argonaute 5 from Arabidopsis with 59.52% of identity
• Blastx: Protein argonaute 5 from Arabidopsis with 64% of identity
• Eggnog: eukaryotic translation initiation factor 2c(ENOG410XP07)
• Kegg: Link to kegg annotations (AT2G27880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453909.1)
• Pfam: N-terminal domain of argonaute (PF16486.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;