Id Trinity | TRINITY_DN51876_c0_g3_i3 |
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Name Transcript | Ll_transcript_447438 |
Sequence | CCTCAACCGTTTCATAACTGCTTTATGCTTATGTTGTGTTCTTTCACTTGTGTTTCTTGGGTTTGTCCAACTTTGTATTTTATTACAGTTTTCTACTTTC ACCATCATAACTGAATTGATTGTGTGTTTTGAACTCTGAATTTCCAATCCCAGAAATGGATATTTATTTAACTGTCTCATTATTGGAGTAATTAATATCT TCCAGTTTCCAATTTATCAAATACTATCCGCTTTCTTATTTTCCTGATATGTATCATTTTTGTTAGAAAATTAATTAAATGTAGAGTTGAAGAAGAAAAA ATAAAAATAATTTTTTTTGAAAGAATAATGATATTGTGAAAAAAGAATAAAAGTAATATAAATATAGAGATACTCATAATTTATATGAATATAAAATTAG AACTTAGGTAAAATAGGAAACATAAATTACTCCATGGTAATTATTTTATGTTTTGCCATTATATTAGTATAGATATATGTCATCCAATTTATGGAGTTGC ATGTAATTTTTTTTAATTTTGGATGATATCATTTCATATTTCAGTCTTTGGCTTTAGTTTTTCTATACTATATACATCAGTTTTGAGTGTTGACTATGAG TTATGACTTTTTGTTGGCTTCTATCATAAGTTGTCTCTTGTTATATTTGTTAAGTTGTTAATTAATCTAGATTTTAGAGTCATCAGTGAAAGATGGTTAC CCTTTTCTAAACCTTATCTCATATCATAACTTAGTGATTCACACACTAATTTTTTTTTTGTAATTTGTAACTTATAAGCTCTATACTAGAATTTTAGTAA TAATTTGAGTTATTGCTTACTAACAACTTGGATATCATTGTTTATCATCACTTATTGACCCACACACTATATTTTTCTTTGTAATTTATAAGCTTCTGTT CAAGAATTTTAGTGATAATATAAGTTGGTACTTAATGACAACTTGGATATCATTGTTTTGCAGACCTTAATGTGATGTATGATTTCTGGTGTTGGTGTGA TGCTGATTAAATTTTAGCAATACCTGCAACTTCCTAAGAGCGCTGATAAGAAGATGCAGTTATATCATCATCCGTTTGATTTGGACAGCCAGAAGGTGAG ACTTGCATTGGAAGAGAAAGGAATTGATTATACATCATACCATGCCAATCCGATAACTGGGAAGAATTTGGACTCCTCATTCTTCAAGATGAATCCCAGT GGAAGACTCCCGGTTTTTCAAAATGGCTCGCACATCATTTACAAGACAATTGATATAATTCAGTATGTTCTCTTCACAACTTTTCGTCATCCCGTTATTA CTGACTTGAATAGATGTGTGTACAATGCAATATTAGGAGTGAACATAAGAATATAATAGATTTATGCAACATTAGAAGTTCACCTAAGAATAAATTTAAA ATTGAAGTTTTTATTTTCCGAAGTATAAAGCTAAACCAATTCCATTGAAGCAGCCTATTGTATATGCACTGTGAATAATAGAGCAGTTCTTTCTGGTTTC CTGATAAAGCTTAATCATCGTGTTTGGATTTACCTATAAATGCTTTTGTTAGAAGATGCTTTATGGTGAAATTGGATTTCAGGTATATTGAAAGAATTGC TGAGGTCTCCTCAGGGTCTGAGACTATCAGTACCAGTGGCAGGGAAGTAACCAAATGGATGCAGAAGATACAAGAGTGGGATCCCAAGTATTTTTCACTA TCATATATACCAGAGAAACACCGACTTTATGTTTCCAAGTTTATAAGGCGGGTGGTGATTGCTCGTATGGCAGAGTCTCCTGAATTAGCAGGTGCTTACC ATAAGAAGTTAAAAGAAATCTATCAGACTGAAGAAAAATTGAAAGACACAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGAATTCTTGATGAAGT GGAGAGGCAGCTGAGTGAAACACGTTATTTAGCAGGTGAACAGTTTAGCATGGCTGATTTGATGCTCATTCCATTGTTGGCTCGATTAGTTGTCTTGGAT TTAGAGGGCGAATACATAACTAGTAGACCAAACATTGTTGAGTACTGGTTTATGGTTCAGCAGAGACCCAGTTATAAAAAGGTGATTGGTAAGCATTTTG ATGGTTGGAGAAAGCATAAAACTTTATTGAAAACGTGGTGCTTTGTCTGTATTAGAAGTTTTCTGAAGAGGTACTAATGAAGTAAATATATATTACTCAT TGTTTGCTAAAGGCAGTTGAATAAGTGAACATATGAAAGGGCTTTGTGTGTTGTAGATAAGGAGGATTTCTGATAGACCTTGTTCTTTGTTTTTATTTCA ATTTGTTTTCTCTCAAGAAGGGGGGATTATTTTTCTTTCTCCCTCAAGTAATGGTGATGCTAGGTTCTGGGCATAGGTGGGTTGGTTTCTCCTGATTTGT TCCCGGGTGTGATATATGTCAATGGTTTGCTTGCAGGCATGATTTATCATAGAACCTTATGGTGTTGTTTGATCTATGTAGCCGATCCGAAAAAGACTTG GTTGTTGTAGGATGAAATGGAAGGGAAATAGGGGATGCATGTTAGAGTAACCACTCGCTATTAACATCTCTGGACTCATTTCTGAATCTTCATGCTTTCC ATCTTAATTATTATGTCAAAAGAGAGAAAAGAAGAGGAAAATTTTGTGTTCCTTCTATCAATTAAAGATTTCTGCGCAATGTTTTGTCTACTGATGTTGG AACAGTGTTTTTCTGTGAGGGATTGCTGCTTTTTATGTGTACACTAATTTTGTCTATAAGAGAAGGTTTGCAATGGAAAAGTATTAACAGTACAGACTGC TTTGATGCATAAACTGCCCCGTCAGCAAATAGAAGCATGTCAACCCAACTTTAATAATGTAAATAACAGATCTTTATAAGTTCAGATAAAGAATGAGATA GAACCCACATTGACATAATAAGGACATCAATGTCATTATTTTTATATAATTTGTCAAAATAGACAATGAATAAAATCTCTCAATTCACACTAGGCATAAA GATTCATAAGTCAAGACAGACACTTACTTCTTCAAGTTTTGGGTGGACTGAGAGAAGAGGAATGCTGTAATTGAATGTGATTTTCATTGAATAATATTTT TTCAGGACAATGAATTTGATAACACTATCAAAAGAGAAACAAAAATAACTCCTTTTCCTTTGACCAATGTTGGTTTCTACTGCTGTGCATGCTAATTAAA TATTATTGCCACCTTTATCATCTCTGCGGACTATATCCTCCAAATATGTGCCTTTTGATTGTTTTGGTACATCATCTCCT BLAST |
Tissue | pods |
Gene name | LI_gene_188225; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447438
Blastp | Glutathione S-transferase TCHQD from Arabidopsis with 65.99% of identity |
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Blastx | Glutathione S-transferase TCHQD from Arabidopsis with 65.99% of identity |
Eggnog | ganglioside induced differentiation associated protein(ENOG410YE2J) |
Kegg | Link to kegg annotations (AT1G77290) |
CantataDB | Link to cantataDB annotations (CNT0000875) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416876.1) |
Pfam | Glutathione S-transferase, C-terminal domain (PF14497.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |